| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_1385 |
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| Symbol | livM |
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| ID | 5109438 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 1549996 |
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| End bp | 1551267 |
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| Gene Length | 1272 bp |
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| Protein Length | 423 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640502614 |
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| Product | leucine/isoleucine/valine transporter permease subunit |
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| Protein accession | YP_001186882 |
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| Protein GI | 146306417 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4177] ABC-type branched-chain amino acid transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.121753 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 0.219132 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCCCA CCACCATCAA GAGCCTCAAA TCCGCGATTT TCAGCGCCCT GCTGGTGCTG
ATCATCTCCT ACCCGGTACT GGGCCTGAAG CTGACCACCG TAGGCATCAG CCTGCGCGTG
GAAGGTGCCA CCGCCTTCGA ACTCTGGTGC ATCGGCGGCG CCGCCGCGCT GATCTTCCTC
TGGCAACTGC TGCGTGACCG CATCACCCCG GCCTGGGCCC AACTGCCCAA GCTGCCCAGC
GGCTCCGGCC AGATCGGCAA CTTCCTCACC CTGCCCTCCA CCCAGCGCTG GATCATCCTG
GCGATGGTCA TGGTGGCACT GGTGTGGCCG TTCTTCGCCA GCCGCGGCGC GGTGGACATC
GCCACGCTGA TCCTGATCTA CGTGATGCTC GGCCTCGGCC TGAACATCGT CGTGGGCCTG
GCCGGTCTGC TCGACCTGGG CTACGTCGGC TTCTACGCCG TCGGCGCCTA CAGCTACGCG
ATCCTGGCGC ACTACTTCGG TCTGGGCTTC TGGATCTGTC TGCCGCTGGC CGGCATGATG
GCGGCGCTGT TCGGCTTCCT GCTGGGCTTC CCGGTGCTGC GCCTGCGCGG TGACTACCTG
GCCATCGTCA CCCTCGGTTT CGGCGAGATC ATTCGCATCC TGCTGCGCAA CATGACCGAG
TACACCGGTG GCCCCAACGG TCTGAGCATC GCCAACGAAA ACAAGCCGAC CCTGTTCGGT
CTGTCCTTCG AGCGCCGTGT GCCGGCGGAC ATGCCGACCT TCCATGGCTT CTTCGAGATC
GCCTACAACT CGCAGTACAA GGTGATCTTC CTCTACCTGA TCGCTCTGCT GCTGGTGCTG
CTGACCCTGT TCCTGGTCAA CCGCCTGCTG CGCATGCCGA TCGGTCGCGC CTGGGAAGCC
CTGCGCGAGG ACGAGATCGC CTGCCGTGCA CTGGGTCTGA ACCCGACCGT GATCAAGCTC
TCGGCCTTCA CCATCGGCGC CAGCCTGGCA GGTTTCGCCG GCAGCTTCTT CGCCGCGCGT
CAGGGCCTGG TGACGCCGGA GTCGTTCACC TTCATCGAGT CGGCGATGAT CCTCGCCATC
GTGGTACTCG GCGGCATGGG CTCGCAGCTG GGCGTGATCC TCGCTGCCAT CGTCATGGTG
ATGCTGCAGG AAATGCGGGA ACTGAGTGAG TACCGCATGC TGTTCTTCGG TCTGGTCATG
ATCTTCATGA TGATCTGGCG CCCGCAAGGG TTGCTGCCGA TGCAACGTCC CCACCTGGAG
CTGAAGCGAT GA
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| Protein sequence | MSPTTIKSLK SAIFSALLVL IISYPVLGLK LTTVGISLRV EGATAFELWC IGGAAALIFL
WQLLRDRITP AWAQLPKLPS GSGQIGNFLT LPSTQRWIIL AMVMVALVWP FFASRGAVDI
ATLILIYVML GLGLNIVVGL AGLLDLGYVG FYAVGAYSYA ILAHYFGLGF WICLPLAGMM
AALFGFLLGF PVLRLRGDYL AIVTLGFGEI IRILLRNMTE YTGGPNGLSI ANENKPTLFG
LSFERRVPAD MPTFHGFFEI AYNSQYKVIF LYLIALLLVL LTLFLVNRLL RMPIGRAWEA
LREDEIACRA LGLNPTVIKL SAFTIGASLA GFAGSFFAAR QGLVTPESFT FIESAMILAI
VVLGGMGSQL GVILAAIVMV MLQEMRELSE YRMLFFGLVM IFMMIWRPQG LLPMQRPHLE
LKR
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