Gene Pmen_1382 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_1382 
Symbol 
ID5109435 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp1547474 
End bp1548334 
Gene Length861 bp 
Protein Length286 aa 
Translation table11 
GC content68% 
IMG OID640502611 
Producthypothetical protein 
Protein accessionYP_001186879 
Protein GI146306414 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.300588 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value0.327464 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCAAAT CCCTGCTCCT GCTACTGGTC CTCAGCCTGC TGCTCGGTGC CTGCAGCCGC 
ATCGACCTGG CCTACCGCAA TCTGGACCGA CTGATTCCCT GGAAGCTCGG CGACTACGTG
GCCCTGAACA GCGAACAGAA GGCCTGGCTC AAACCGCAGC TGCAGGAGCA CCTGAGCTGG
CACTGCAGCG TGGAGTTGCC GCGCTATGTG GATTGGCTGG AGCGTAGCCG GCAGGCGCTG
AGCAGCCGCG ACAGCCAGGC TCTGGCCGGC CAGCTGGAAG CCTTCGACAG CGCCATGCAG
CGCATCGCCG TGGAGATCAC CCCCAGCGCC ACCGAGCTGC TGCGCGGCCT GAGCCCGCGT
CAGGTGGAGC AACTGTTCGC CGCGCTCGAC GAGCAGAACG CCGAACTGCG CGAAGAGTTT
CTCGAACCGC CGCTGGAACA GCAGATCGCC CGCCGCGCCG AGCGCATGAG CGAGCGCCTG
CAGCCGTGGT TCGGCAAGCT CAACACGGCG CAGCGCCAAC GGGTCGACGA CTGGGCCGAG
GGCCTGGGCG CGCAGAATCG GGTGTGGCTG GACAACCGCC TGGCCTGGCA GCAGGCCCTG
CGCGAAGCGC TCGAGGCACG CCGCGGCGAT GACTTCGACG CGCGCATGGC GGCGCTGCTG
CAGGAGCGCG AACGTTTCTA CACCGACGCC TACAAGGCCA GCTACCAGGC CAATCGCCAG
GCCATGGCCG AGATGATCGT CGACCTCATC GCGCAGGCCG ACGACTCGCA GCTCAGACGG
GCACAGCAGC GCCTGAGCAG CCTGCAGGCC GACCTGGCCG CGCAGCAGTG CCAAGCGGGC
GAGTCGGTAG CCAGCCGTTG A
 
Protein sequence
MRKSLLLLLV LSLLLGACSR IDLAYRNLDR LIPWKLGDYV ALNSEQKAWL KPQLQEHLSW 
HCSVELPRYV DWLERSRQAL SSRDSQALAG QLEAFDSAMQ RIAVEITPSA TELLRGLSPR
QVEQLFAALD EQNAELREEF LEPPLEQQIA RRAERMSERL QPWFGKLNTA QRQRVDDWAE
GLGAQNRVWL DNRLAWQQAL REALEARRGD DFDARMAALL QERERFYTDA YKASYQANRQ
AMAEMIVDLI AQADDSQLRR AQQRLSSLQA DLAAQQCQAG ESVASR