Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_1381 |
Symbol | |
ID | 5109434 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | + |
Start bp | 1546735 |
End bp | 1547424 |
Gene Length | 690 bp |
Protein Length | 229 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640502610 |
Product | uracil-DNA glycosylase |
Protein accession | YP_001186878 |
Protein GI | 146306413 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0692] Uracil DNA glycosylase |
TIGRFAM ID | [TIGR00628] uracil-DNA glycosylase |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.541157 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 0.225249 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGAAG ATCGCATCAA GCTCGAAGCC AGCTGGAAAC ACGCGCTGCG CGAGGAGTTC GACAAGCCCT ACATGAAGGA GCTGCGCGAG TTCCTGCGGG CGGAGAAGGC CGCCGGCAAG GAGATCTATC CGCCGGGCCC GCTGATCTTC AACGCCCTCA ATTCCACGCC GCTGGACCAG GTCAAGGTGG TGATCATCGG CCAGGACCCA TACCACGGGC CGGGTCAGGC GCACGGGTTG TGCTTCTCGG TGCAGCCGGG CGTGCAGACG CCGCCGTCGC TGGTGAACAT CTACAAGGAA CTCAAGCGCG ACCTCAATCT CGACATCCCC GCGCACGGCT ACCTGCAGAG CTGGGCCGAT CAGGGCGTGC TGCTGCTCAA CACCTCGCTG ACGGTGGAGC GCGGCAATGC CGGCTCGCAC GCGGCCAAGG GCTGGCAGCC GTTCACCGAC CGGGTGATCG AGGTGGTCAG CGAGCATCAG CCCAAGGTGG TGTTCCTGCT CTGGGGCAGC CACGCGCAGA GCAAGCAGCG TCTGATCGAC CCGACCAAGC ATCTGGTGCT GCGTTCGCCG CATCCATCGC CGCTGTCCGC CCATCGCGGT TTCATCGGCA ACGGTCATTT CAGCCGCTGC AACCAGTTCC TCGCACAGAA CGGCATGAGC CCCATCGACT GGCGTCTGCC GGCGCTATAG
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Protein sequence | MTEDRIKLEA SWKHALREEF DKPYMKELRE FLRAEKAAGK EIYPPGPLIF NALNSTPLDQ VKVVIIGQDP YHGPGQAHGL CFSVQPGVQT PPSLVNIYKE LKRDLNLDIP AHGYLQSWAD QGVLLLNTSL TVERGNAGSH AAKGWQPFTD RVIEVVSEHQ PKVVFLLWGS HAQSKQRLID PTKHLVLRSP HPSPLSAHRG FIGNGHFSRC NQFLAQNGMS PIDWRLPAL
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