| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_1377 |
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| Symbol | |
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| ID | 5109430 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 1542761 |
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| End bp | 1544257 |
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| Gene Length | 1497 bp |
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| Protein Length | 498 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640502606 |
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| Product | methylmalonate-semialdehyde dehydrogenase [acylating] |
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| Protein accession | YP_001186874 |
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| Protein GI | 146306409 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
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| TIGRFAM ID | [TIGR01722] methylmalonic acid semialdehyde dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.373951 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 0.282571 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCCGTA CCCTGCCGCA ACTGATCGAC GGTCAATGGC GCGCCAGCCA GGCTCACGAA
CTGATCGAAG TCACCGACCC GGCCACCCAG GAGGTGCTCG CCCTCGCCCC CAAAGCCACC
GCCGAGGAAA TCGAGGCGGC CGTGGCCAGC GCCCAGCAGG CCTTTCTCGC CTGGCGCGAG
GTGCCGGTAT CGGAGCGGGC CCGCCTGATG CTGCGCTACC AGCATCTGCT CAAGGAACAT
CACGACGAGT TGGCGGAGAT TCTCGCCGCG GAAACCGGCA AGACCTTCGC CGATGCCAAG
GGCGACGTGT GGCGCGGCAT CGAAGTGGCC GAGCATGCCG CCAACATCGC CAGCCTGGTG
ATGGGCGAGA CGGTGGAGAA CGTCGCTCGC GAGATCGACA CCGCCAGCTG GATTCAGCCG
CTGGGCGTGT GCGTCGGCAT CACCCCGTTC AATTTCCCGG CGATGATCCC GCTGTGGATG
TTTCCGCTGG CCATCGCCTG CGGCAATACC TTCATCCTCA AGCCGTCGGA ACAGGACCCG
ATGACGCCCA ACCGGCTGGC CGAACTCTTC CTCGAGGCCG GCGCGCCGGC CGGGGTGCTG
CAGGTGCTGC ATGGCGGTCG CGAGCAGGTC GACGCCCTGC TGGTGCACCC GGCGGTACGC
GCGGTGTCCT TCGTCGGCTC GGTAACGGTG GGCCAGCACG TCTATCGCAC CGGCACCCAG
CACCTGAAAC GGGTGCAGGC CTTCGCCGGA GCCAAGAACC ATATGGTGAT CATGCCGGAC
GCGCCTAAGG ATCAGGTGCT CAGCAACCTG CTCGGCGCCA GTTGCGGCGC CGCCGGGCAG
CGCTGCATGG CGATCAGCGT GGCGGTGTTC GTCGGCGAGG CGAAACAGTG GATCGACGAG
TTGGCGACGC AGATGGCCGC ACTGCGCCCC GGTCACTGGC AGGATGGCGG CGCCGCCTAC
GGCCCGCTGA TCAGCCCGCA GGCACGCCAG CGCGTGCTGC GCTTGATCGA TGAAGGCAAG
GCCGAGGGGG CCGAGTGCCT GCTCGACGGT TCGCAGTGCA CAGTGGAGGG CTACCCGGAC
GGCAACTGGG TCGGGCCGAC CCTGTTCCGC GGCGTGACGC CGAAGATGGG CCTGTACCGC
GAGGAGATCT TCGGCCCGGT GCTGGTGTGC ATGGAGGTGG ACAGCCTGGA AGAGGCCATC
GCACTGGTCA ACGCCAGCCC CTACGGCAAC GGCACCAGCC TGTTCACCCG TTCCGGCGGC
GCCGCGCGGC ACTTCCAGCA CGCGGTGGAG GTCGGCCAGG TGGGCATCAA CGTGCCCATT
CCGGTGCCGC TGCCGTTCTT TTCCTTCACC GGCTGGAAGG GTTCGTTCTA CGGCGACCTG
CACGCCTACG GCAAGCAGGC GGTGCGTTTC TACACCGAAA CCAAGACGGT CACGACCCGC
TGGTTCGACG ACAAGCCACT CGGCGAGGGG CCGAACATGA CTATCCAGCT GAAATGA
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| Protein sequence | MPRTLPQLID GQWRASQAHE LIEVTDPATQ EVLALAPKAT AEEIEAAVAS AQQAFLAWRE
VPVSERARLM LRYQHLLKEH HDELAEILAA ETGKTFADAK GDVWRGIEVA EHAANIASLV
MGETVENVAR EIDTASWIQP LGVCVGITPF NFPAMIPLWM FPLAIACGNT FILKPSEQDP
MTPNRLAELF LEAGAPAGVL QVLHGGREQV DALLVHPAVR AVSFVGSVTV GQHVYRTGTQ
HLKRVQAFAG AKNHMVIMPD APKDQVLSNL LGASCGAAGQ RCMAISVAVF VGEAKQWIDE
LATQMAALRP GHWQDGGAAY GPLISPQARQ RVLRLIDEGK AEGAECLLDG SQCTVEGYPD
GNWVGPTLFR GVTPKMGLYR EEIFGPVLVC MEVDSLEEAI ALVNASPYGN GTSLFTRSGG
AARHFQHAVE VGQVGINVPI PVPLPFFSFT GWKGSFYGDL HAYGKQAVRF YTETKTVTTR
WFDDKPLGEG PNMTIQLK
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