| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_1376 |
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| Symbol | |
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| ID | 5109429 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 1541416 |
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| End bp | 1542663 |
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| Gene Length | 1248 bp |
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| Protein Length | 415 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640502605 |
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| Product | extracellular ligand-binding receptor |
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| Protein accession | YP_001186873 |
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| Protein GI | 146306408 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.416271 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 0.0984666 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCCAAC TCACAGCCAT CCTGGCCCTG TGGGCCGGGG TTACCGCCTG CGTGCAAGCT
GCCGAGCCGA TCACCCTCGG GCTCAACTAC CCGCGCACAG GACCATACAA GGAGGAGGGA
TTGGCGCAGA TGCGTGGAGC CCTGCTGGCC ATCGATGAAA TCAATGCCGC TGGCGGCGTG
CTGGGAAGGC CCCTGCGCCT GTCCAGCAAG GACACCGCCT CGCGCCCGGC CAAGGCGGAA
AAGAACGTCG ACAAGCTGGC CGCCGAAGGC GCGGTGATGC TCTTCGGCGG TGCCTCCAGC
GCCGTGGCCA TCGCCGCCGG CAAACGCGCC AAGCAGCATG GCCTGCTGTA TTTCGGCACC
CTCACCTACT CCAATGACAC CACCGGCAAG GACGGCCACC GCTACATGTT CCGCGAGTGC
AACAACGCCT GGATGAGCGC CAAGGTGCTC GGCCAGTACC TGAGCAAGAC CTTGCCGAAC
AAGCGCTACT TCTACGTCAC GGCCGATTAC ACCTGGGGCC ATACCAGCGA GGCCTCGTTG
CGCCAGGCCA CTTCGAGCGA CAACGCCGCC CAGCACGCCG GCGTGCGCGT CCCCTTCCCT
GGCGCGCGCC TGGCCGATTA TCAGGATGCC CTGACCCAGG CCGCCGCGAG CAAGGCCGAC
ATCCTCGCCC TGGTGCTGTT CGGCGAGGAC CTGGTGCGCG CCATGCGCAT CGCCAAGGAC
CTGGGTCTGA CCGAGCGCAT GCAGATCGTC GCCCCCAACC TCACCCAGAG CATGGTCGAA
CAAGCCGGCC CGGACCTGAT GCAGGGCGTG ATCGGCACCG AACCCTGGAC CTGGCGCGTG
CCGGCGCTGG AGAAGTCCGC GCGCGGCGAA GCCTTCGTCC AGGCCTTCAA GACCCGCTAC
CAGATGTACC CATCCAGCTC CGCCGCTTCG GCCTACAGCA TCGTCCAGCA GTGGGCCGAT
GCCGCCAAGC GCGCCAACAG CCTCGATAGC GAAGCGCTGA TCAAGGCGCT GGAGGGCCAC
CGCTACAGCC TGTTGAAGGG CGAGCAGCAA TGGCGCGCCT TCGATCACCA GAACCTGCAG
ACGGTCTACG CGGTGAAAGT GAAGCCGCGC GACGAGGTGC TCAAGGACCC GCTCAAGCAG
GACTACTTCG AAATCGTCGA CCGCCTCGAC GCCAGCACGG CGCTGCCCAG CCTCGCCGAC
TGGCAGGCCG AGCGCCGGGC CGGCGGCCAA CCCCTGACCT TGCAATGA
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| Protein sequence | MRQLTAILAL WAGVTACVQA AEPITLGLNY PRTGPYKEEG LAQMRGALLA IDEINAAGGV
LGRPLRLSSK DTASRPAKAE KNVDKLAAEG AVMLFGGASS AVAIAAGKRA KQHGLLYFGT
LTYSNDTTGK DGHRYMFREC NNAWMSAKVL GQYLSKTLPN KRYFYVTADY TWGHTSEASL
RQATSSDNAA QHAGVRVPFP GARLADYQDA LTQAAASKAD ILALVLFGED LVRAMRIAKD
LGLTERMQIV APNLTQSMVE QAGPDLMQGV IGTEPWTWRV PALEKSARGE AFVQAFKTRY
QMYPSSSAAS AYSIVQQWAD AAKRANSLDS EALIKALEGH RYSLLKGEQQ WRAFDHQNLQ
TVYAVKVKPR DEVLKDPLKQ DYFEIVDRLD ASTALPSLAD WQAERRAGGQ PLTLQ
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