| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_1368 |
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| Symbol | |
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| ID | 5109421 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 1532753 |
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| End bp | 1533664 |
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| Gene Length | 912 bp |
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| Protein Length | 303 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 640502597 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001186865 |
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| Protein GI | 146306400 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.0323343 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGACC TACGCCAGCT TCGTCATTTC GTGGCACTCG CCGAACACGG TCACTTCGCC
CGTGCCGCCG AGGCCGTGCA CCTCAGCCAG CCGGCGTTGA GTCGCAGCAT CCAGGCCCTG
GAGGCGCAGC TCGGCTGCAG CCTGGTGGAC CGCCACAGCC GCGGCATCAG CCTGACCGCC
CACGGCCAAC TGGTGCTGGA ACATGCCCGC CGCCTGTTGG CCGGCAGCCT GGCGTTGAGC
AATGCGGTCA ACCAGCTGGG CAATCTTGAA GCCGGCGAGC TGCGCCTCGG CGCCGGCCCC
TACCCGGCCG CGCGGTTGAT ACCGCAGGCC CTCGGGCAAT TGCTGCAGCG GTATCCGCGG
GTGCAGGTGA AGCTGGACAT CGGCAACTGG CTGGAACTGC GCGACAGCCT GCTGGACTCG
GCCATCGAGC TGTTCGTCGC CGATATCCGC GAGCTGCAGG GTGATACGCA GCTGCAGATC
GAACCGCTGC GCGTGCATCG GGGCGTGCTG TTCTGCCGCC CGGCGCACCC GTTACTGCAG
CGGCGCGATC TGCAACCGCG CGACCTGCTG GACTTTCCCC TGGCCGGCAC GCAGTTGCCG
CAGGCGGTCG AGCGCAGCCT GGGTCACGCC AGCGGACGCG CGCAACCCTT GAGCGTGCAG
TGCGACAACT TTCTCGTGCT CAAGCGCCTG GTGGCCGACA GCGACGTGCT GAGCATGGCG
CCCTGGGACG TGATCGCCGA AGAGGTCGCA GCCGGCCAAC TGAGCCTGCT GCCGCTGGCC
CCGGCGAGCC TGCAGCAGCA GTCGGCCTAT GGCCTGGTCA GCCGCGCCGG ACACAGCCTG
TCGCCGGCGG CGCAGGCCAT GGTCGAGGAG ATTCGTCAGC TGGATGCAGC GACTCCGCGC
GTGGCGGGTT GA
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| Protein sequence | MNDLRQLRHF VALAEHGHFA RAAEAVHLSQ PALSRSIQAL EAQLGCSLVD RHSRGISLTA
HGQLVLEHAR RLLAGSLALS NAVNQLGNLE AGELRLGAGP YPAARLIPQA LGQLLQRYPR
VQVKLDIGNW LELRDSLLDS AIELFVADIR ELQGDTQLQI EPLRVHRGVL FCRPAHPLLQ
RRDLQPRDLL DFPLAGTQLP QAVERSLGHA SGRAQPLSVQ CDNFLVLKRL VADSDVLSMA
PWDVIAEEVA AGQLSLLPLA PASLQQQSAY GLVSRAGHSL SPAAQAMVEE IRQLDAATPR
VAG
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