| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_1361 |
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| Symbol | |
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| ID | 5109414 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 1524621 |
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| End bp | 1525688 |
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| Gene Length | 1068 bp |
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| Protein Length | 355 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640502590 |
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| Product | ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components-like protein |
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| Protein accession | YP_001186858 |
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| Protein GI | 146306393 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components |
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| TIGRFAM ID | [TIGR03427] ABC transporter periplasmic binding protein, urea carboxylase region |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.761855 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 0.0792191 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCAAGT ACCGTCTGCT CTCCTTCGCC GCTGCCGGTC TGGCCGCGCT GCTCAGCTTC
AGCGCCCACG CCGAGAAGAA AGACAGCTTC AGTGTCTGCT GGACGCTCTA CGCCGGCTGG
ATGCCCTGGG GCTATGCCAG CACCTCCGGC ATCATCGACA AATGGGCGAA GAAGTACGGC
ATCGACATCG ATGTCGTGCA GCTCAACGAC TACGTGGAAT CCATCAACCA GTACAGCGTC
GGACAGTTCG ACGGCTGCAC CATGACCAAC ATGGACGCCC TGACCATTCC CGCCGCTGGC
GGCGTGGACA GCACCGCGCT GATCGTCGGC GATTACTCCA ACGGCAACGA CGGCCTGCTG
ATCAAGGGCG AAGGCAAGAC CCTGGCCGAC CTCAAAGGCA TGCAGGTCAA CCTGGTGGAG
CTGTCGGTAT CCCACTACTT CCTCGCCCGC GCTCTGGAAA GCGCCGGCAT GAGCGAGCGC
GACGTGAGCG TGGTGAACAC CTCCGACGCC GACATCATCG CCGCCTTCTC CACCCCCAGC
GTGCAGGCCG CCGCCACCTG GAATCCGATG CTCGCCGAGA TCAAGGCCCA GCCGGGCAGC
ACCGAGGTGT TCGACTCCTC GAAGATCCCC GGTGAAATCC TCGACATGAT GGTGGTCAAC
ACCCAGACGC TGAAGGACAA CCCGGACTTC GGCAAAGCCC TGGTCGGCGC CTGGTTCGAG
ATTCTCGACC TGATGCAGTC CGGCACCGCG GAAGCCACCG AAGCGCTGAC CGACATGGCC
AAGGCCTCCG GTACCGACCT GGCCGGATTC CAGGTCCAGC TGGCGACCAC CAAGCTGTTC
TACACACCCA AGGAAACCCT GGACTTCGTC ACCAGCCCGG CCCTGCCGGA GACCATGACC
AAGGTCGCCA ACTTCAGCTT CGAGCACGGC ATCCTTGGTG AAGGCGCGCG CAGCGCCGAC
GCCATCGGCA TGACCTTCGC GGGCGACGTG ACTACCGGCG ACAGCGCCAA CATCAAGCTG
CGCTTCGACC CGAGCTACAT AGAGATGGCC GTCGACGGCA AGCTCTGA
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| Protein sequence | MRKYRLLSFA AAGLAALLSF SAHAEKKDSF SVCWTLYAGW MPWGYASTSG IIDKWAKKYG
IDIDVVQLND YVESINQYSV GQFDGCTMTN MDALTIPAAG GVDSTALIVG DYSNGNDGLL
IKGEGKTLAD LKGMQVNLVE LSVSHYFLAR ALESAGMSER DVSVVNTSDA DIIAAFSTPS
VQAAATWNPM LAEIKAQPGS TEVFDSSKIP GEILDMMVVN TQTLKDNPDF GKALVGAWFE
ILDLMQSGTA EATEALTDMA KASGTDLAGF QVQLATTKLF YTPKETLDFV TSPALPETMT
KVANFSFEHG ILGEGARSAD AIGMTFAGDV TTGDSANIKL RFDPSYIEMA VDGKL
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