Gene Pmen_1347 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_1347 
Symbol 
ID5109400 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp1507646 
End bp1508197 
Gene Length552 bp 
Protein Length183 aa 
Translation table11 
GC content70% 
IMG OID640502575 
Productsuperoxide dismutase, copper/zinc binding 
Protein accessionYP_001186844 
Protein GI146306379 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2032] Cu/Zn superoxide dismutase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones47 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACCCC TGATTCCCCT GGCATTCGCG CTGCTTGGCG CCACCAGCCT GCAGGCCAGC 
GAGACGGTCA CCGTGACGCT CGAGCAGGCC ACCGAGAACG GTCCTGGCGC GCCTGTCGGC
AGCGTGACCA TCAGCCAGTC GCCCTACGGG CTGGTCTTTA CCCCCGAATT GCAGGGCCTG
GAGCCTGGCG TCCACGGCTT TCACGTGCAC ACGGAGGCCA ACTGCAACGC CGCCGAGGTG
GATGGCAAGC TGACGCCGGC CGGCGCGGCC GGCGGCCACT GGGACCCGCA GAACGCCGGG
CGCCATGGCT TCCCCTGGGA AGACGACGCC CACCTGGGCG ACCTGCCTGC GCTGCTGGTG
ACCGAGGATG GCACCGCCAG CCAGCCGGTG CTGGCGCCGC GACTCAAGAA CCTGCAAGAC
CTGCACAACC GTTCGCTGAT GATCCACGCC GGCGGTGACA ATCACGCCGA TCACCCGCAG
CCGCTGGGTG GTGGCGGGGC GCGCGTGGCC TGCGGGCTGA TCAAGGTGCC GACCAGCACC
ACGCCGATCT GA
 
Protein sequence
MKPLIPLAFA LLGATSLQAS ETVTVTLEQA TENGPGAPVG SVTISQSPYG LVFTPELQGL 
EPGVHGFHVH TEANCNAAEV DGKLTPAGAA GGHWDPQNAG RHGFPWEDDA HLGDLPALLV
TEDGTASQPV LAPRLKNLQD LHNRSLMIHA GGDNHADHPQ PLGGGGARVA CGLIKVPTST
TPI