| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_1345 |
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| Symbol | |
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| ID | 5109398 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 1504068 |
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| End bp | 1506920 |
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| Gene Length | 2853 bp |
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| Protein Length | 950 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640502573 |
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| Product | glycine dehydrogenase |
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| Protein accession | YP_001186842 |
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| Protein GI | 146306377 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0403] Glycine cleavage system protein P (pyridoxal-binding), N-terminal domain
[COG1003] Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain |
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| TIGRFAM ID | [TIGR00461] glycine dehydrogenase (decarboxylating) |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCAAGC TCGATACCCA GAACGAATTC ATCGCCCGCC ACATCGGCCC GCGCGATGCC
GACACCGCCG CCATGCTCGA ACTGCTCGGC TATGACTCGG TGGACGCGCT GACCAATGCC
GTGATCCCCG AGAGCATCAA GGGCACCAGC ATCCTCGGCG AGCAGCCGGG CCTGTCGGAA
GCCGACGCCC TGGCCAAGAT CAAGGCCATC GCCGCGAAGA ACCTGCAGTT CAAGAACTAC
ATCGGCCAGG GTTACTACGG CACGCACACG CCGAGCCCGA TCCTGCGCAA CCTGCTGGAA
AACCCGGCCT GGTACACCGC CTACACCCCG TACCAGCCGG AGATTTCCCA GGGCCGCCTG
GAAGCGCTGC TGAACTTCCA GACCCTGATC AGCGACCTCA CCGGCATGCA GATCGCCAAC
GCATCCTTGC TCGACGAAGC CACCGCTGCC GCCGAAGCCA TGACCTTCTG CAAGCGTCTG
TCGAAGAACA AGGCCGCCAA CACCTTCTTC GTTTCCCAGC ATTGCCACCC GCAGACCCTC
GACGTGCTGC GCACCCGTGC CGAGCCGCTG GGCATCGATA TCGAAGTCGG CGACGAAGCC
ACCATTACCG ACGCCAGCGC CTACTTCGGC GCGCTGCTGC AGTACCCGGC GAGCAACGGC
GACATCTTCG ACTACCGCGC CCTGGTCGAG CGTTTCCACG CCGCCAATGC CCTGGTCGCC
GTAGCCGCCG ACCTGCTGGC CCTGACCCTG CTCACCCCGC CGGGCGAGTT CGGTGCCGAC
GTCGCCCTGG GCAGCGCCCA GCGCTTCGGT GTGCCGCTGG GCTTCGGTGG CCCGCACGCC
GCCTACTTCG CCACCCGCGA CGCGTTCAAG CGCGACATGC CGGGCCGCCT GGTGGGCATG
TCGGTCGACC GTTTCGGCAA GCCGGCCCTG CGCCTGGCCA TGCAGACCCG CGAGCAGCAC
ATCCGCCGCG AGAAGGCCAC CAGTAACATC TGTACCGCGC AGGTGCTGCT GGCCAACATC
GCCAGCATGT ACGCCGTGTA CCACGGCCCG AAAGGCCTGA CCGCCATCGC GCAGCGCGTA
CACAGCTTCA CCGCCATCCT CGCCCTGGGC CTGACCAAGC TGGGCCACAG CGTCGAGCAG
CAGCACTTCT TCGATACCCT GAGCATCAAG ACCGGCGCCA AGACCGCCGA GCTGCATGCC
AAGGCCCGTG CTGCCGGCAT CAACCTGCGC GAGATCGACG CCGAGCGTCT GGGTCTGTCG
CTGGACGAAA CCACCGACCA GGCCGCCGTC GAAGCGCTGC TGAACCTGTT TGCCGCTGAC
CAGGCCGCCC CTGCCGTTGC CGACCTGGCC GCACAGGTCG CCAGCCGCCT GCCGCAAGGC
CTGCTGCGCC AGTCGGCGAT CCTGCAGCAC GAAGTGTTCA ACCGCTACCA CAGCGAAACC
GAGCTGATGC GCTACCTGCG CAAGCTGGCC GACAAGGACC TGGCCCTGGA CCGCAGCATG
ATCCCGCTGG GCTCCTGCAC CATGAAGCTC AACGCCGCCA GCGAGATGAT CCCGGTCACC
TGGCCGGAGT TCGGCAACCT GCACCCCTTC GCTCCGGTCG AGCAGGCTGC GGGTTACACC
CAGCTGACCA CTGAGCTGGA AGCCATGCTC TGCGCCGCCA CCGGCTACGA CGCTGTGTCG
CTGCAGCCCA ACGCCGGCTC CCAGGGCGAG TACGCGGGCC TCTTGGCCAT CCGTGCCTAC
CACCTGAGCC GCGGCGACGA TCAGCGCGAC ATCTGCCTGA TCCCGCAATC GGCCCACGGC
ACCAACCCGG CGACCGCCTC CATGGCCGGT ATGCGCGTGG TGGTGACCGC CTGTGACGCG
CGCGGCAACG TCGACATCGC CGATCTGAAG GCCAAGGCCG AAGAGCACAA GGATCGCCTG
GCCGCGATCA TGATCACCTA CCCGTCCACC CACGGTGTGT TCGAGGAAGG CATCCGCGAG
ATCTGCCAGA TCATCCACGA CAACGGCGGC CAGGTGTACA TCGACGGCGC CAACATGAAC
GCCATGGTCG GCCTGTGCGC CCCGGGCCAG TTCGGCGGCG ACGTCTCACA CCTGAACCTG
CACAAGACCT TCTGCATCCC GCACGGCGGC GGCGGCCCGG GCGTCGGCCC GATTGGCGTC
AAGTCGCACC TGGCGCCGTT CCTGCCGGGC CATGGCCACA TGGCACGCAA GGAAGGTGCG
GTGAGCGCCG CGCCGTTCGG CAGCGCCAGC ATCCTGCCGA TCACCTGGAT GTACATCACC
ATGATGGGCG GCAACGGCCT CAAGCGCGCG TCGCAGATGG CCATTCTCAA CGCCAACTAC
ATCGCCCGTC GTCTGGAAGA GCACTACCCG GTGCTGTACT CCGGCGAAGG CGGCCTGGTG
GCGCACGAGT GTATCCTCGA CATCCGTCCG CTCAAGGACA GCAGCGGCAT CAGCGTCGAC
GACGTGGCCA AGCGCCTGAT CGACTTCGGC TTCCACGCCC CGACCATGTC CTTCCCGGTG
GCCGGCACCC TGATGATCGA GCCGACCGAG AGCGAGTCCA AGGAAGAGCT GGATCGCTTC
TGCGACGCCA TGATCGCCAT CCGCGAGGAA ATCCGCGCGG TCGAGCAGGG CCGCCTGGAC
AAGGACGACA ACCCGCTGAA GAACGCCCCG CACACCGCCC TGGAACTGGT CGGCGAATGG
CACCACGCCT ACAGCCGCGA GCAGGCCGTG TACCCGGTGG CGAGCCTGAT CGAGGCCAAG
TACTGGCCGC CGGTGGGCCG TGTTGACAAC GTCTACGGCG ACCGCAACCT GGTCTGCGCC
TGCCCGTCCA TCGAGGCGTA TCAGGACGCG TAA
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| Protein sequence | MTKLDTQNEF IARHIGPRDA DTAAMLELLG YDSVDALTNA VIPESIKGTS ILGEQPGLSE
ADALAKIKAI AAKNLQFKNY IGQGYYGTHT PSPILRNLLE NPAWYTAYTP YQPEISQGRL
EALLNFQTLI SDLTGMQIAN ASLLDEATAA AEAMTFCKRL SKNKAANTFF VSQHCHPQTL
DVLRTRAEPL GIDIEVGDEA TITDASAYFG ALLQYPASNG DIFDYRALVE RFHAANALVA
VAADLLALTL LTPPGEFGAD VALGSAQRFG VPLGFGGPHA AYFATRDAFK RDMPGRLVGM
SVDRFGKPAL RLAMQTREQH IRREKATSNI CTAQVLLANI ASMYAVYHGP KGLTAIAQRV
HSFTAILALG LTKLGHSVEQ QHFFDTLSIK TGAKTAELHA KARAAGINLR EIDAERLGLS
LDETTDQAAV EALLNLFAAD QAAPAVADLA AQVASRLPQG LLRQSAILQH EVFNRYHSET
ELMRYLRKLA DKDLALDRSM IPLGSCTMKL NAASEMIPVT WPEFGNLHPF APVEQAAGYT
QLTTELEAML CAATGYDAVS LQPNAGSQGE YAGLLAIRAY HLSRGDDQRD ICLIPQSAHG
TNPATASMAG MRVVVTACDA RGNVDIADLK AKAEEHKDRL AAIMITYPST HGVFEEGIRE
ICQIIHDNGG QVYIDGANMN AMVGLCAPGQ FGGDVSHLNL HKTFCIPHGG GGPGVGPIGV
KSHLAPFLPG HGHMARKEGA VSAAPFGSAS ILPITWMYIT MMGGNGLKRA SQMAILNANY
IARRLEEHYP VLYSGEGGLV AHECILDIRP LKDSSGISVD DVAKRLIDFG FHAPTMSFPV
AGTLMIEPTE SESKEELDRF CDAMIAIREE IRAVEQGRLD KDDNPLKNAP HTALELVGEW
HHAYSREQAV YPVASLIEAK YWPPVGRVDN VYGDRNLVCA CPSIEAYQDA
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