| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_1343 |
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| Symbol | |
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| ID | 5109396 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 1501435 |
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| End bp | 1502559 |
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| Gene Length | 1125 bp |
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| Protein Length | 374 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640502571 |
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| Product | glycine cleavage system T protein |
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| Protein accession | YP_001186840 |
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| Protein GI | 146306375 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0404] Glycine cleavage system T protein (aminomethyltransferase) |
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| TIGRFAM ID | [TIGR00528] glycine cleavage system T protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.60604 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 47 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCACTG AAACTCTCGC CAAGACTCCG CTGCACGCCC TGCACCTCGA ACTCGGCGCG
CGCATGGTGC CCTTCGCCGG CTATGACATG CCCGTGCAGT ATCCGCTGGG CGTGATGAAG
GAGCATCTGC ACACCCGCGA GGCCGCCGGC CTGTTCGACG TTTCGCACAT GGGCCAGATC
CTGCTGCGTG GCGAGCACGC CGCGCGCGCC CTGGAAACCC TGGTGCCGGT GGACATCATC
GACCTGCCGG TGGGCCTGCA GCGCTACGCC ATGTTCACCG ATGCCCAGGG CGGCATCCTC
GACGACCTGA TGGTCGCCAA CCTGGGTGAC GACACCCTGT ACCTGGTGGT CAACGCCGCC
TGCAAGGATC AGGACCTGGC CCACCTGAAG AAGCACATCG GCGAGCAGTG CCAGATCGAG
TGCCTGTTCG AGGAGCGCGC CCTGCTCGCC CTGCAAGGCC CGAAAGCGGT CGACGTGCTG
GCCCGCCTCG CACCTGAAGT GAGCAAGATG ACCTTCATGC AGGTGGCCCG CGTGCGCCTG
CTGGGCAGCG AATGCATCGT CAGCCGCAGC GGCTACACCG GCGAAGACGG TTTCGAGATT
TCCGTCGCCG TCGACCAGGC CGAAACCCTG GCGCGCAGCC TGCTGGCCGA AGCGGAAGTC
GAGGCCATCG GTCTGGGTGC GCGCGACTCG CTGCGCCTGG AAGCCGGCCT GTGCCTGTAC
GGCCACGACA TGAGCAGCGC CACCACGCCG ATCGAAGCCA GCCTGCTGTG GGCCATCTCC
AAGGTGCGTC GTGCAGATGG CGAGCGTGCC GGCAACTTCC CGGGCGCCGA GCGCGTATTC
GAGCAGCAGC AAAAAGGCGT GGCGCGCAAG CGCGTCGGCC TGCTGCCGCA GGAGCGCGTA
CCGGTGCGTG AAGGCGCGGA AATCGTCGAC GCCGACGGTA CCGTGATCGG CCAGGTATGC
AGCGGCGGCT TCGGCCCGAC CCTCGGCGCA CCGGTGGCCA TGGGTTACGT CAATGCCAGC
CACACCGCCG TCGACAGCGA CGTCTGGGCC GTGGTGCGCG GCAAGCGCGT GGCGATGAAA
GTGGCCAAGA CCCCGTTCGT GCCGCAGCGC TACTACCGCG GCTGA
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| Protein sequence | MTTETLAKTP LHALHLELGA RMVPFAGYDM PVQYPLGVMK EHLHTREAAG LFDVSHMGQI
LLRGEHAARA LETLVPVDII DLPVGLQRYA MFTDAQGGIL DDLMVANLGD DTLYLVVNAA
CKDQDLAHLK KHIGEQCQIE CLFEERALLA LQGPKAVDVL ARLAPEVSKM TFMQVARVRL
LGSECIVSRS GYTGEDGFEI SVAVDQAETL ARSLLAEAEV EAIGLGARDS LRLEAGLCLY
GHDMSSATTP IEASLLWAIS KVRRADGERA GNFPGAERVF EQQQKGVARK RVGLLPQERV
PVREGAEIVD ADGTVIGQVC SGGFGPTLGA PVAMGYVNAS HTAVDSDVWA VVRGKRVAMK
VAKTPFVPQR YYRG
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