| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_1339 |
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| Symbol | |
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| ID | 5109392 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 1498025 |
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| End bp | 1499293 |
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| Gene Length | 1269 bp |
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| Protein Length | 422 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640502567 |
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| Product | outer membrane porin |
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| Protein accession | YP_001186836 |
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| Protein GI | 146306371 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.868317 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 45 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGCAC GCAACACCCT TCCCCTGACC CTGCTTGGCA GCACCGCGCT GGCGCTCGTG
ATGCCCACCG CCACCCATGC CGCCGGCTTC GTCGAAGACG CCAAGGTCAC CCTCGGCCTG
CGCAACTACT ACTTCAACCG CAACTTCCTC AACCACTCCG GCCCGTCGGT GCAGGGCAGC
GATCAGGGCC AGGCGGCCGA GTGGACCCAG AGCTTCATCC TCGATGCCCG CTCCGGTTTC
ACCCAAGGCA CCGTCGGCTT CGGTCTGGAC GTACTCGGCC TGTATGCAGT CAAGCTCGAT
GGCGGCAAGG GCAGCATCAA CAGCGGCCTG CTGCCGGTAC ATGGCACGGG CAATGACCGT
CATGCCCCCG ATGATTACGG TCGCACCGCC GTTGCCGCCA AGGCCAGGTT GTCCAAGACC
GAGCTGAAGG TGGGCGAGTG GTTCGCCGTG CTGCCGATCC TGCGCGCGGA CGACGGCCGT
GCGCTGCCGC AGACCTTCCA GGGCGCACAG ATCACCTCCA GTGAAATCGA CGGTCTGAAC
CTGTACGGCG GCCAGTTCTG GAAGAACAGC CAGCGTAACG ACGCCAGCCG CGAGGACATG
TCGTTCAACG GTATCGAGGG CGATGATTTC AACTTCGGCG GCGGTGAGTA CCGCTTCAAC
GGCAACAACA CCATGGTCGG CGCATGGCAT GCGCGCCTGG AGGACGTGTA CCAGCAGAGC
TTCCTGCAGC TGACCCACAG CCAACCGGTC GGCGACTGGG TGCTGGGCGC CAACCTGGGT
TACTTCAATG GCAAGGAAGA AGGCGCAGCC AAGGCCGGCA ACCTGGACAA CAAGGTCTAT
CAGGGCAGCC TCTCCGCCAA GACCGGCAAC AACACCTTCA TGGTGGCCTA CCAGCGCCTG
AGCGGCGATA CCAAGTTTCT GCGCATTGAC GGCTCCAGCG GCGGCACCCT GGTCAACGAC
GGCTTCACCG CCAGCTTCGA CGCGCCCGAA GAGCGCTCCT GGCAAGTGCG TCACGACTAC
AACTTCGCCG GCCTCGGCAT CCCCGGCCTG ACCCTGATGA ACCGCTACAC CAGCGGCTCC
AACATCCACA CCGGCGGCCG TACCGATGCC GAGGAATGGG CGCGCGAATC GGAGCTGGCC
TACACCATCC AGGAAGGCGG CCTGAAGAAC CTGAGCATCC GCTGGCGTAA CTCCAACGTC
CGCCGTGACG TTGGCCAGGA TGCCCACGAG AACCGACTGA TCATCAACTA CCCGCTGTCG
ATCCTGTAA
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| Protein sequence | MTARNTLPLT LLGSTALALV MPTATHAAGF VEDAKVTLGL RNYYFNRNFL NHSGPSVQGS
DQGQAAEWTQ SFILDARSGF TQGTVGFGLD VLGLYAVKLD GGKGSINSGL LPVHGTGNDR
HAPDDYGRTA VAAKARLSKT ELKVGEWFAV LPILRADDGR ALPQTFQGAQ ITSSEIDGLN
LYGGQFWKNS QRNDASREDM SFNGIEGDDF NFGGGEYRFN GNNTMVGAWH ARLEDVYQQS
FLQLTHSQPV GDWVLGANLG YFNGKEEGAA KAGNLDNKVY QGSLSAKTGN NTFMVAYQRL
SGDTKFLRID GSSGGTLVND GFTASFDAPE ERSWQVRHDY NFAGLGIPGL TLMNRYTSGS
NIHTGGRTDA EEWARESELA YTIQEGGLKN LSIRWRNSNV RRDVGQDAHE NRLIINYPLS
IL
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