| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_1330 |
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| Symbol | |
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| ID | 5109383 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 1490114 |
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| End bp | 1490956 |
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| Gene Length | 843 bp |
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| Protein Length | 280 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640502558 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_001186827 |
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| Protein GI | 146306362 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4132] ABC-type uncharacterized transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.0147671 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGTCCA CCATTTCCAG CAAGGGCTGG GCACTGCTGT GCCTGGTGCC CTTCGCCCTG
TTCTTCTTCG CCTTCCAGAT CGCACCGTTG GCCTGGGTGG CGAGCAACAG CCTGAACACT
GCCGAGGGCT GGGGCCTGGG CAACTTCCAG CAGGCCTTCT CCTCGGCCTT CTACCGCCAG
GCCATGCGCC ACAGCCTGGA GGTCGCCTTC TGGTCGAGCC TGTTCGGCAT CGTCGTCGCC
ATCATCGGCA GCTATTCGCT GCGCCAGGTC AGCAGCCGCC TGCGCGACTT CGTCATGGCG
TTTTCCAACA TGACCAGCAA CTTCTCCGGG GTGCCGCTGG CCTTCGCCTT CATCATCCTG
CTCGGCTTCA ACGGCGCGCT GACCATCCTG CTCAAGCAGA TGGGCGTGAT CGAGGACTTC
AACCTCTACT CCAAGACCGG CCTGATCGTC CTTTACACCT ACTTCCAGAT TCCCCTCGGC
GTATTGCTGC TCTACCCGGC CTTCGACGCC CTGCGCGAAG ACTGGCGCGA GTCGGCCGAA
CTGCTCGGCG CCAATACCTG GCAGTTCTGG CGCCATATCG GCCTGCCGGT GCTGACCCCG
GCGTTGCTCG GCACCTTCGT CATCCTCCTG GCCAACGCCC TGGGCGCCTA TGCCACGGTG
TATGCACTGA CCACCGGCAA CTTCAACATC CTGCCGATCC GTATCGCGTC GATGGTTTCC
GGCGACATCT TCCTTGACCC GAACATGGCC AGCGCGCTGG CGATGGTGCT GGTCGGCCTG
ATGACCCTGA TCACCATCGT CCACCAATGG CTGCTGCGCC GGAGCTACCA TGTCGCCCGC
TGA
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| Protein sequence | MKSTISSKGW ALLCLVPFAL FFFAFQIAPL AWVASNSLNT AEGWGLGNFQ QAFSSAFYRQ
AMRHSLEVAF WSSLFGIVVA IIGSYSLRQV SSRLRDFVMA FSNMTSNFSG VPLAFAFIIL
LGFNGALTIL LKQMGVIEDF NLYSKTGLIV LYTYFQIPLG VLLLYPAFDA LREDWRESAE
LLGANTWQFW RHIGLPVLTP ALLGTFVILL ANALGAYATV YALTTGNFNI LPIRIASMVS
GDIFLDPNMA SALAMVLVGL MTLITIVHQW LLRRSYHVAR
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