| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_1323 |
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| Symbol | |
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| ID | 5109376 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 1483344 |
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| End bp | 1483907 |
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| Gene Length | 564 bp |
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| Protein Length | 187 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640502551 |
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| Product | peroxiredoxin |
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| Protein accession | YP_001186820 |
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| Protein GI | 146306355 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0450] Peroxiredoxin |
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| TIGRFAM ID | [TIGR03137] peroxiredoxin |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.337282 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 0.829751 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCCCTCA TCAATACTCA GATCCAGCCG TTCAAGGTCA ACGCTTTCCA CGCTGGCGAG
TTCATCGAAG TCACCGAGCA GTCCCTGAAG GGCAAATGGT CCGTGCTGAT CTTCATGCCG
GCTGCCTTCA CCTTCAACTG CCCGACCGAA ATCGAAGACG CCGCCAACAA CTACGCCGAG
TTCCAGAAGG CCGGTGCCGA GGTCTACATC GTGACCACCG ACACCCACTT CTCGCACAAG
GTATGGCACG AAACTTCGCC GGCCGTTGGC AAGGCTCAGT TCCCGCTGAT CGGCGACCCC
ACCCACCAGC TGACCAACGC TTTCGGCGTA CACATTCCGG AAGAAGGTCT GGCGCTGCGC
GGCACCTTCA TCATCAACCC GGAAGGTCAG ATCAAGACTC TGGAGATCCA CTCCAACGAG
ATCGCCCGTG ACGTGTCCGA GACCCTGCGC AAGCTGAAGG CCGCTCAGTA CACCGCCGCC
AACCCGGGTC AGGTTTGCCC GGCCAAGTGG AAAGAAGGCG AAGCCACTCT GGCTCCGTCG
CTGGACCTGG TTGGCAAGAT CTAA
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| Protein sequence | MSLINTQIQP FKVNAFHAGE FIEVTEQSLK GKWSVLIFMP AAFTFNCPTE IEDAANNYAE
FQKAGAEVYI VTTDTHFSHK VWHETSPAVG KAQFPLIGDP THQLTNAFGV HIPEEGLALR
GTFIINPEGQ IKTLEIHSNE IARDVSETLR KLKAAQYTAA NPGQVCPAKW KEGEATLAPS
LDLVGKI
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