| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_1322 |
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| Symbol | |
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| ID | 5109375 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 1482226 |
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| End bp | 1483188 |
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| Gene Length | 963 bp |
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| Protein Length | 320 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640502550 |
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| Product | alcohol dehydrogenase |
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| Protein accession | YP_001186819 |
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| Protein GI | 146306354 |
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| COG category | [C] Energy production and conversion
[R] General function prediction only |
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| COG ID | [COG0604] NADPH:quinone reductase and related Zn-dependent oxidoreductases |
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| TIGRFAM ID | [TIGR02824] putative NAD(P)H quinone oxidoreductase, PIG3 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.0680057 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAGGCAT TGCAAGGCGT CGAGGGGCAG GCGCAGTGGC TGGAGCAACC CGCTCAGGCC
TGCGACGCGG GGCAGATTCG GGTCAAGGTG GCTGCCGCCG GGCTGAATCG TGCCGACCTG
TTGCAGCGTG CCGGTCTCTA TCCGCCGCCG CCTGGTGCCA GCCAGGCCCT GGGCCTGGAG
TGCTCCGGGG TGGTGATCGA GGTCGGTGCA GGCAGCGCCT GGCAGGTGGG CGATCGCGTC
TGCTGCCTGT TGGCCGGCGG TGGCATGGCC GAGGAAGTGG TGCTCGATGC GCGCCACGCC
TTGCCGATAC CCGAAGGCCT CAGCCTGGTC GAGGCGGCGG TAGTGCCGGA GGTCTATGCC
ACCGCCTGGC TCAATCTGTT CCAGCTCGGT GCGCTGCGCC CGGGGGAAAA GGTGCTGCTG
CATGCCGGCG CCAGCGGCGT GGGTTCGGCG GCCATTCAGC TGTGCAAGGC ATTCGGCAGC
CCCTGCTGGG TCAGTGTCGG CTCCGCCGAG CGGCTGGCCT ACTGCGAGGC GCTGGGCGCG
CAGGGTGGAG CGCTGAGAGG CGAGGATTTG CAGAGCCTGC GCGACTTCGC TCCCTACGAC
GTGATCCTCG ATCCGGTTGG CGGGCAGTAC GCCGCGCTCA ATCTGGAGCT GCTGGCACGT
GACGGGCGCT GGATCAACAT CGGCCTGATG GGCGGCCGCG AGGCGACCCT GGACCTGGCG
CAGGTGCTGG GCAAGCGCAT TCAGCTGATC GGTTCAACCC TGCGTAACCG TGACGAGCAG
TTCAAGGCGG ACCTGCTGCG CGATCTGCAG CAGCAGGTCT GGCCGCTGTT CGCCGAAGGA
CGATTAAAGC CGCAACTGGA GCGCAGTTTT GCGATCAAAG ACAGTGAGGC GGCGTTCGAG
ACACTCGCCG GTAACCAGGT CGCAGGTAAA CTCGCGCTGC TGATTGATCC CACCCTGGTC
TGA
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| Protein sequence | MKALQGVEGQ AQWLEQPAQA CDAGQIRVKV AAAGLNRADL LQRAGLYPPP PGASQALGLE
CSGVVIEVGA GSAWQVGDRV CCLLAGGGMA EEVVLDARHA LPIPEGLSLV EAAVVPEVYA
TAWLNLFQLG ALRPGEKVLL HAGASGVGSA AIQLCKAFGS PCWVSVGSAE RLAYCEALGA
QGGALRGEDL QSLRDFAPYD VILDPVGGQY AALNLELLAR DGRWINIGLM GGREATLDLA
QVLGKRIQLI GSTLRNRDEQ FKADLLRDLQ QQVWPLFAEG RLKPQLERSF AIKDSEAAFE
TLAGNQVAGK LALLIDPTLV
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