| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_1321 |
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| Symbol | |
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| ID | 5109374 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 1480016 |
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| End bp | 1482130 |
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| Gene Length | 2115 bp |
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| Protein Length | 704 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640502549 |
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| Product | carboxyl-terminal protease |
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| Protein accession | YP_001186818 |
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| Protein GI | 146306353 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0793] Periplasmic protease |
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| TIGRFAM ID | [TIGR00225] C-terminal peptidase (prc) |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.184977 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTTATC ACCTGCCACT ACGTCGAATC AGCATGAAGC GCTCCCTTGC AAGTACCGCC
CTCGCCCTCG TACTCGGCTT CAGTGCCCTG CCGTTGGCGG CCAAGACCAC CACTGCTCCT
GGCTGGGACT ACCTGCAGCC GGATCGCGAG CAAGTGATTG CCAGCCTCAA CGTAGTGGAA
TTGCTCAGAC GCCATCACTA CAACAAGCCG CCGCTGAATG ACGAGCGCTC GATTCAGATC
TACGACAACT ACCTGAAGTT GCTCGATCCG ACGCGCAGTT ATTTCACCGC CGGCGACATC
GCCGAATTCA ACCAGTGGCG AACCAAGTTC GATGATCTGC TCAAGAGCGG CGATCTCGAA
CCAGGCTTCG CCATCTATCG CCGCCACCTG ACCCGCCTGC AGGAGCGCCT GGACTATGCC
CTGGCAGAGC TCGGCAAGGG CGTCGACAAG ATCGACTTCA CCATTGATGA AGAGCTGCAG
GTCGACCGCG AGAAAGCCCC CTGGGCCAAG GATCGCGCCG AACTCGACGA GCTCTGGCGC
AAACGCCTCA AGGACGAAGT GCTGCGGCTG AAGATTGCCG GCAAGGAAAC CAAGGACATC
CAGGAACTGC TGACCAAGCG TTACCGGAAC CAGCTGGCGC GTCTCAAGCA GACCCGTGGC
GAAGACGTGT TCCAGGCCTA CATCAACGCC TTCGCCACCA CCTACGATCC GCACACCACC
TACCTGTCGC CGGACAATGC GGAAAACTTC GACATCAACA TGAGCCTGTC GCTGGAAGGC
ATCGGCGCCG TGCTGCAGAG CGACAACGAG CACGTCAAGG TCGTACGCCT GGTACCGGCC
GGCCCGGCGG AGAAGAGCAA GCAGATCGCC CCGGCGGACA AGATCGTCGG TGTCGCCCAG
GGTAACGGCG AGATGGTCGA CGTGATCGGC TGGCGCCTGG ACGAAGTGGT CAAGCTGATC
CGCGGCCCGA AAGGCTCCAC CGTGCGCCTG GAAGTGATTC CGGCCAGCAA CCCGCCCAGC
GACCAGACCA GCAAGGTGGT CACCATCACC CGTGAGGCGG TCAAGCTGGA AGAGCAGGCG
GCCAAGAAGA AGGTCCTGGA ACTCAAGCAC GAGGGCCGCG ACTACAAGCT CGGGGTCATC
GAGCTGCCGG CCTTCTATCT CGACTTCAAG GCTTTCCGCG CTGGCGACCC GAACTACAAG
AGCACCACCC GCGACGTCAA ACGCCTGCTC GACGAGCTGC AGGCCGAGAA GGTCGACGGC
GTGGTGATCG ACCTGCGCAA CAACGGTGGC GGCTCGCTGC AGGAAGCCAC CGAGCTGACC
AGTCTGTTCA TTGAACAGGG CCCCACCGTG CTGGTGCGCA ATGCCGACGG CCGTGTCGAC
GTGCTCGCCG ACGACAGCAA AGGCGTCTAC TACAGCGGTC CCCTGGCCGT GCTGGTCAAC
CGCCTGTCCG CCTCGGCCTC GGAGATCTTC GCCGGCGCCA TGCAGGACTA TCACCGCGCG
CTGATTCTCG GCGGCCAGAC CTTCGGCAAG GGCACGGTGC AGACCATCCA GCCGCTCAAC
CACGGCGAGC TGAAACTGAC CCTGGCCAAG TTCTACCGCG TCTCGGGGCA AAGCACGCAG
AACCAGGGCG TGATTCCCGA CATCCTCTAC CCCGACGTGA TGGACACCAA GGACATCGGC
GAAAGCGCGC TGCCTGCCGC CCTGCCCTGG GACAGCATCC GCCCGGCGAT CAAGCCCGAA
CTCGACCCGA TCAAGCCCTT CCTGAGCGAA CTGAAAGTGC GCCATGACCG GCGCACGGCC
AATGATCCGG ACTTCGTCTT CACCCGCGAC CGCCTGAGCC TGGCCAAGAA GCTGATGGCC
GAAACCACCG TCAGCCTCAA CGAGCAGACG CGTCGTGCCC GCCAGGCCGA GGTGGAAGCC
AAGCAGCTGA AGCTGGAGAA CAACCGCCGG CTGGCCAAAG GCGAAGATCC GCTCAAGGAA
CTGCAGAAGG AAGACGAGGA CGCCCTGCCG CTGGAAGACG GCAAGAGCAC GCCGGAAGAT
GACGCCTACC TGGCCGAATC CGGGCGCATC CTGCTCGACT ATCTGGGACT CAACCCCTCA
CTCGCGCTGC ACTGA
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| Protein sequence | MRYHLPLRRI SMKRSLASTA LALVLGFSAL PLAAKTTTAP GWDYLQPDRE QVIASLNVVE
LLRRHHYNKP PLNDERSIQI YDNYLKLLDP TRSYFTAGDI AEFNQWRTKF DDLLKSGDLE
PGFAIYRRHL TRLQERLDYA LAELGKGVDK IDFTIDEELQ VDREKAPWAK DRAELDELWR
KRLKDEVLRL KIAGKETKDI QELLTKRYRN QLARLKQTRG EDVFQAYINA FATTYDPHTT
YLSPDNAENF DINMSLSLEG IGAVLQSDNE HVKVVRLVPA GPAEKSKQIA PADKIVGVAQ
GNGEMVDVIG WRLDEVVKLI RGPKGSTVRL EVIPASNPPS DQTSKVVTIT REAVKLEEQA
AKKKVLELKH EGRDYKLGVI ELPAFYLDFK AFRAGDPNYK STTRDVKRLL DELQAEKVDG
VVIDLRNNGG GSLQEATELT SLFIEQGPTV LVRNADGRVD VLADDSKGVY YSGPLAVLVN
RLSASASEIF AGAMQDYHRA LILGGQTFGK GTVQTIQPLN HGELKLTLAK FYRVSGQSTQ
NQGVIPDILY PDVMDTKDIG ESALPAALPW DSIRPAIKPE LDPIKPFLSE LKVRHDRRTA
NDPDFVFTRD RLSLAKKLMA ETTVSLNEQT RRARQAEVEA KQLKLENNRR LAKGEDPLKE
LQKEDEDALP LEDGKSTPED DAYLAESGRI LLDYLGLNPS LALH
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