| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_1312 |
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| Symbol | |
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| ID | 5109128 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 1471118 |
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| End bp | 1472941 |
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| Gene Length | 1824 bp |
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| Protein Length | 607 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640502538 |
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| Product | phosphogluconate dehydratase |
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| Protein accession | YP_001186809 |
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| Protein GI | 146306344 |
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| COG category | [E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism |
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| COG ID | [COG0129] Dihydroxyacid dehydratase/phosphogluconate dehydratase |
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| TIGRFAM ID | [TIGR01196] 6-phosphogluconate dehydratase |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.19652 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 0.978584 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCATCCCC GCGTTGTTGA AGTCACCGAC CGTCTGATCG AGCGCAGCCG CGCCACCCGC
CAGCGCTATC TGGCCATGAT CCGCGCGGCC GCCAGTGAAG GGCCGCAGCG CGGCAAGCTG
CAATGCGCCA ACTTCGCCCA CGGCGTGGCC GGCTGCACCG GGCATGACAA GCAGACGCTG
CGTCTGATGG ACGCGGCCAA CGTGGCCATC GTTTCTGCTT ATAACGACAT GTTGTCGGCC
CACCAGCCCT ACGAGCACTT TCCCGAACAG ATCAAGCAGG CCCTGCGCGA TATGGGCTCG
GTGGGCCAAT TCGCCGGCGG CGTGCCGGCG ATGTGCGACG GCGTCACTCA GGGTGAGCCG
GGCATGGAAC TGGGCATCGC CAGCCGCGAG GTGATCGCCA TGGCCAGCGC CGTGGCCCTG
TCGCACAACA TGTTCGACGC CGCGCTGTAC CTGGGCGTGT GCGACAAGAT CGTGCCGGGG
CTGGTGATGG GTGCGTTGCG CTTCGGTCAT CTGCCGTCGC TGTTCGTGCC GGCCGGGCCC
ATGACCTCGG GCCTGTCCAA CAAGGAAAAG GCCGACGTGC GTCAGCGTTA CGCCGAGGGC
AAGGCCAGCC GCGACGAGCT GCTGGCCGCG GAGATGGCCG CCTATCACGG GCCGGGCACC
TGCACCTTCT ATGGCACCGC CAATACCAAC CAACTGTTGA TGGAGGTGAT GGGCCTGCAC
CTGCCGGGCG CTTCCTTCAT CAATCCGGGC ACGCCGCTGC GCGAGGCGCT GACCCGCGAG
GCGGCGCAGC AGGTCACTCG CCTGACCAAG CAGAGCGGAA ACTTCATGCC CATCGGCGAG
ATCGTCGACG AGCGCTGCCT GGTCAACTCC ATCGTCGCCC TGCATGCCAC CGGCGGCTCG
ACCAATCACA CCCTGCACAT GCCGGCCATT GCCCGCGCTG CCGGCATCCT GCTGACCTGG
CAGGACATGG CCGATCTGTC CGAGGTGGTG CCGACCCTGG CCCACGTCTA TCCCAACGGC
AAGGCCGACA TCAATCACTT CCAGGCCGCC GGTGGCATGG CCTTCCTCAT TCGCGAGCTG
CTCGAGGCCG GGCTGCTGCA CGAGGAGGTC AATACCGTGG CCGGCCGCGG CCTGTCGCGC
TACACCCGCG AACCCTTCCT CGAGGGCGGC AAGCTGGTCT GGCGCGACGG CCCCACCGCG
AGCCTGGAGG AGAGCGTGCT GCGCCCGGTG GCGCGGCCGT TCTCGGCCGA AGGCGGTTTG
CGCCTGATGC AGGGCAACCT GGGGCGCGGG GTGATGAAGG TGTCCGCGGT GGCGCCGGAA
CATCAGGTGG TGGAAGCGCC GGCGCTGGTG TTCGAGGATC AGTTGGAGCT GGTCGAGGCG
TTCAAGGCCG GCAAGCTGGA GCACGATTTC GTCGCCGTGG TGCGTTTCCA GGGGCCGCGC
AGCAACGGCA TGCCCGAGCT GCACAAGATG ACCCCTTATC TGGGCGTGCT GCAGGATCGC
GGCTTCAAGG TGGCACTGGT CACCGACGGG CGCATGTCCG GCGCCTCGGG CAAGATCCCG
GCGGCTATCC ATGTCTGTCC CGAGGCCTTC GACGGCGGCC CGCTGGCGCG GGTGCGCGAC
GGCGATCTGC TACGCGTCGA TGGGCAGAGC GGGAAGTTGC TGCTGCTTGG CGACGAGGCC
GAGTTCGCCT CGCGCGAGCT GGCGCCGGCG CCGCCACCGG CCAGCGGTTG TGGTCGCGAG
CTGTTCGCCT TCATGCGCCA CAACTTCAGC ACGGCGGAGC AGGGCGCCAG TGCCTTTACC
GAGAGTCTCG AGTCGCTGGT CTGA
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| Protein sequence | MHPRVVEVTD RLIERSRATR QRYLAMIRAA ASEGPQRGKL QCANFAHGVA GCTGHDKQTL
RLMDAANVAI VSAYNDMLSA HQPYEHFPEQ IKQALRDMGS VGQFAGGVPA MCDGVTQGEP
GMELGIASRE VIAMASAVAL SHNMFDAALY LGVCDKIVPG LVMGALRFGH LPSLFVPAGP
MTSGLSNKEK ADVRQRYAEG KASRDELLAA EMAAYHGPGT CTFYGTANTN QLLMEVMGLH
LPGASFINPG TPLREALTRE AAQQVTRLTK QSGNFMPIGE IVDERCLVNS IVALHATGGS
TNHTLHMPAI ARAAGILLTW QDMADLSEVV PTLAHVYPNG KADINHFQAA GGMAFLIREL
LEAGLLHEEV NTVAGRGLSR YTREPFLEGG KLVWRDGPTA SLEESVLRPV ARPFSAEGGL
RLMQGNLGRG VMKVSAVAPE HQVVEAPALV FEDQLELVEA FKAGKLEHDF VAVVRFQGPR
SNGMPELHKM TPYLGVLQDR GFKVALVTDG RMSGASGKIP AAIHVCPEAF DGGPLARVRD
GDLLRVDGQS GKLLLLGDEA EFASRELAPA PPPASGCGRE LFAFMRHNFS TAEQGASAFT
ESLESLV
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