| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_1307 |
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| Symbol | |
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| ID | 5109123 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 1465920 |
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| End bp | 1467755 |
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| Gene Length | 1836 bp |
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| Protein Length | 611 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640502533 |
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| Product | ABC transporter related |
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| Protein accession | YP_001186804 |
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| Protein GI | 146306339 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 0.556896 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGTTTC GCCGTTTCGA GTCGTTGATC GACGTTTTCA AACCCAGCCC GGATGTCGCG
CCACCCGAGG GTATGCTGCG CTTCTACGGT CACTACCTGA GGCAGGTCTG GCCGCTGATG
CTCGCCGTGC TGATCGTCGG CTTCGTCGCC GCGGTGATCG AAGTGGCGCT GTTCAGCTTC
CTCGGGCAGT TGATCGACAT GGCCCAGGCC AGTACGGATG CCCGCAGCTT CTTCGCCGAG
CACCAGAGCG AGTTGCTGTG GATGGTGTTG GTGGCGCTGG TCATCCGCCC CCTGGTGTTC
GGCCTGCACA ACCTGCTCAC CCATCAGGCG GTCAACCCTG GCCTGACCAA CCTGATCCGC
TGGCAGAACC ACCGCTACGT GCTCAAGCAG AGCCTGAGCT TCTTCCAGAA CGACTTCGCC
GGCCGCGTCG CCCAGCGCGT GATGCAGACC GGCCCATCGC TGCGCGACTC GGCCATGCAG
GTGATCGACG CGCTGTGGCA CGTGGTGGTC TACGCCGGCA GCGCGCTGTA CCTGTTCGCG
GCCGCCGATC TGCGCCTGGT GATACCGCTG GCCCTGTGGA TCATCGGCTA CAGCGCCGCT
CTCTGGTACT TCGTGCCGCG CATCAAGGCG CGCTCGGCAG CCGCCTCCTC GGCGCGCTCC
AAGGTCATGG GCCGGGTGGT GGACGGCTAC AGCAACATCG CCACGCTCAA GCTGTTCGCC
CACTCCCAGG AAGAAGAAGG CTACGCCCGC GAAGCCATGC AGGAGCTGCT CGACAAGTTC
CGCCTGCAGT CGCGCACCAT CACCGCCCTG GACTTTCTCA TCACCTGCCT GAACGGCGTG
CTGATCGTCG GTACCGGCGC CCTGGCGATG TGGCTGTGGA GCCAGTCGCT GATCACCACC
GGCGCCATCG CCCTGTCCCT GGGGCTGGTG ATCCGCATCA ACAACATGGC CGAGTGGATC
ATGTGGGTGG TCAACGGCAT CTTCGAGAAC GTCGGCACCG TGCAGGACGG CATGCAGACC
ATCGTCCAGC CGCGCCAGGT GCTCGACCGC GCCGATGCCC GGCCAATCCA GGTGCGCGAG
GGCGGCGTGC GTTTCGAGGA CATCCACTTC CACTACGGCA AGCGCGGCGG CGTGATCGCC
GGCCTCAGCC TGGACATTCG CCCCGGCGAG AAGATCGGCC TGGTCGGCCC CTCCGGCGCC
GGCAAGTCGA CCCTGGTCAA TCTGCTGCTG CGTCTGTACG ACCTGGAGAG CGGGCGCATC
CTGATCGACG GTCAGGACAT CGCCGAGGTG ACCCAGGAAA GCCTGCGCGC CAATATCGGC
GTGGTAACCC AGGACACCTC GCTGCTGCAC CGCTCGATCC GCGACAACCT GCGCTACGGC
AAGCCGGACG CCAGCGAGGA GCAGCTCTGG GAGGCCGTGC GCAAGGCCCG TGCCGACAAC
TTCATCCCGA CCCTGGACGA TAGCCAGGGT GGTCGTGGCA TGGATGCCCA GGTCGGCGAG
CGCGGGGTCA AGCTGTCCGG CGGTCAGCGT CAGCGCATCG CCATCGCCCG CGTGCTGCTC
AAGGACGCGC CGATCCTGGT GCTGGACGAA GCCACCTCGG CGCTGGATTC GGAAGTCGAG
GCGGCCATTC AGGAAAGTCT GGACAGCCTG ATGGAAGGCA AAACGGTGAT CGCCATCGCC
CACCGCCTGT CCACCATCGC GCGCATGGAT CGGCTGGTGG TGATCGATCA GGGGCGCATC
GTCGAGACCG GCAGCCACGC CGAACTGGTC GAACGCGGCG GTCTGTATGC GCGCCTATGG
CAGCACCAGA CCGGCGGTTT CGTCGGGGTG GAATGA
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| Protein sequence | MLFRRFESLI DVFKPSPDVA PPEGMLRFYG HYLRQVWPLM LAVLIVGFVA AVIEVALFSF
LGQLIDMAQA STDARSFFAE HQSELLWMVL VALVIRPLVF GLHNLLTHQA VNPGLTNLIR
WQNHRYVLKQ SLSFFQNDFA GRVAQRVMQT GPSLRDSAMQ VIDALWHVVV YAGSALYLFA
AADLRLVIPL ALWIIGYSAA LWYFVPRIKA RSAAASSARS KVMGRVVDGY SNIATLKLFA
HSQEEEGYAR EAMQELLDKF RLQSRTITAL DFLITCLNGV LIVGTGALAM WLWSQSLITT
GAIALSLGLV IRINNMAEWI MWVVNGIFEN VGTVQDGMQT IVQPRQVLDR ADARPIQVRE
GGVRFEDIHF HYGKRGGVIA GLSLDIRPGE KIGLVGPSGA GKSTLVNLLL RLYDLESGRI
LIDGQDIAEV TQESLRANIG VVTQDTSLLH RSIRDNLRYG KPDASEEQLW EAVRKARADN
FIPTLDDSQG GRGMDAQVGE RGVKLSGGQR QRIAIARVLL KDAPILVLDE ATSALDSEVE
AAIQESLDSL MEGKTVIAIA HRLSTIARMD RLVVIDQGRI VETGSHAELV ERGGLYARLW
QHQTGGFVGV E
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