Gene Pmen_1300 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_1300 
SymbolmotB 
ID5109116 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp1459122 
End bp1460012 
Gene Length891 bp 
Protein Length296 aa 
Translation table11 
GC content67% 
IMG OID640502526 
Productflagellar motor protein MotB 
Protein accessionYP_001186797 
Protein GI146306332 
COG category[N] Cell motility 
COG ID[COG1360] Flagellar motor protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value0.334413 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGTTGC CTGAAGAGGA AGCCAGGGCG ATGCCCGCCT GGGTCATGAC CTTCGCCGAC 
CTGATGTCGC TGCTGATGTG CTTCTTCGTC CTGCTGCTGT CGTTTTCCGA GATCGATGCG
CAGCGTTTCA AACAGATTGC CGGCGAGCTG GCCAAGGCCT TCGGCGTGCA GCGCGAGGTG
CCGGCTCTGG AAGTGCCGCT GGGCACCAGC CCGGTATTCG ACAAGTTCTC CCCCGGCAAG
CCGGAACCCA CCGAGGTGCA GGAGATTCGT CAGCAGACCA CCACCCAGGA CCCGCAGCTC
GACACCCTGC GCGGCGATGC CGAGGCCGAG CTGCAGGCGC GTGCCGAGGC CCAGGTCGAC
CAGCAGGTGC GCGACAGCGT CGCCGCCCTG CAGCAATTGC TGCAGGGCGA ATTGAGCGAG
GGGCGCCTGC AACTGCTCGA GGAGCGGCGG CGGATCATCC TGCGGGTCGA GGAGCGTGGC
TCCTTCGCCT CCGGTTCGGC CGAGCTGACG CCGGCATTCG AGGACATGCT GCTGGGCATG
AGCGAGCTGC TGGTGGAGAT ACCCGGTACC CTGACCGTCG AGGGACACAC CGACGATGTG
CCGATCAGCA CCGCGCGCTT TCGCTCCAAC TGGGACCTGT CCGCAGCGCG CGCTTCGGCG
GTGGCCAACG CGCTACTGCT CAATCCCGCG CTCGAGCCGC AGCGGCTGGA GGTCAAGGGC
TTCGCCGATA CCCGGCCGCG GGTGGCCAAC GATTCGGCGC AGCAGCGCGC CCTGAACCGG
CGCGTGGAGA TCATCATCGA CCAGAGCGCC AGTGATGAGG ATCAGGCCGA GCAACTGCGC
AGCCTGATGG GGGATCAGCT GCGACACGAG ATGGAGACGC AGCGACACTG A
 
Protein sequence
MELPEEEARA MPAWVMTFAD LMSLLMCFFV LLLSFSEIDA QRFKQIAGEL AKAFGVQREV 
PALEVPLGTS PVFDKFSPGK PEPTEVQEIR QQTTTQDPQL DTLRGDAEAE LQARAEAQVD
QQVRDSVAAL QQLLQGELSE GRLQLLEERR RIILRVEERG SFASGSAELT PAFEDMLLGM
SELLVEIPGT LTVEGHTDDV PISTARFRSN WDLSAARASA VANALLLNPA LEPQRLEVKG
FADTRPRVAN DSAQQRALNR RVEIIIDQSA SDEDQAEQLR SLMGDQLRHE METQRH