| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_1284 |
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| Symbol | |
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| ID | 5109100 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 1443571 |
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| End bp | 1444974 |
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| Gene Length | 1404 bp |
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| Protein Length | 467 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640502510 |
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| Product | beta-lactamase domain-containing protein |
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| Protein accession | YP_001186781 |
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| Protein GI | 146306316 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1236] Predicted exonuclease of the beta-lactamase fold involved in RNA processing |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 0.818199 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCCTGC TCACTTTTCT CGGTGCGATT CAACAGGTCA CCGGCTCCTG CTACCTGGTG
GAAAGCCGCG ACGGCGCCAG GGTCCTGCTC GAATGCGGCA TGCACCAGGG ACGCCGCGAA
GAGGAGGATC AGAACCGCAG CGCCTTCCCC TTCGACCCGC GCAGCCTGGA TGCGGTGGTG
ATCTCCCACG CCCATCTCGA TCACAGCGGG CTGCTGCCGC GCCTGGTCGC CGAAGGCTAT
CGCGGCCCGA TCCACGCCAC CGAGGCCAGC TGCGAACTGC TCGAACTGAT GCTGCTGGAT
TCGGCCTTCC TCCAGGAAAA GGACGCCGAA TGGGAAAACC GCTGGCGCGC ACGCCAGGGC
AAGCCGGCGA TCAAGCCGCT GTATACGATC GCCAACGCCG AACAGGCCCT CAGCCAGCGC
CGCCCCCATG CCTACGGCGT AGCGGTCGAG GTGGCCAAGG GCGTGCAGGT GACCTTCCAC
AACGCCGGTC ATATCCTCGG CTCGGCCATC GTCGAGATGC AGGTGGAGGA CCATCACCTG
CACCGCCATC TGGTGTTCTC GGGCGACCTG GGCAACACCT GCTCGCCGCT GATGCAGGCC
CCGGCGCAGT TGAACAAGGC GGACGTGCTG CTGATGGAGT CCACCTACGG CGACCGCGAC
CACCGCGACA GCGAAGCCAC TCTGGAAGAG CTCGCCGACA TCCTGCAGCA GGCCCATCGT
GATGGCGGCA ATGTGCTGAT TCCCTCTTTC GCCGTCGGTC GCACCCAGGA TCTGATCTAC
TACCTCGGCC GCTTCTACCA AGAGGGCCGT CTGCCCCAGC AGGCGGTGTT CCTCGACAGC
CCCATGGCGA TCCGCGCCAA TGCCATCTAC AGCCGCTTTC ACGATCAGTT CGCCGCCGCG
GACCGCGCCG CCCTGGCCGC CAAGGGCGTG AAGCGGGTCG AGGACTGGCT GCCGATCCTG
CGCTGCACCG CGACGGCCGA AGAGTCGATG GCCATCAACC GGATCAAGAG CGGGGCGATC
ATCATCGCCG GGGCCGGCAT GTGCAATGGC GGGCGTATCG TCCATCACTT CAAGCACAAC
CTCTGGCGCG AGAACTGCCA CCTGGTATTC CCCGGTTTCC AGGCCAAGGG CACGCTGGGC
CGCCTGATCG TCGACGGCGC CGAAACGGTC AAGGTGCTGC ACCAGCGCAT CGCCGTGAAA
GCCAAGGTGC ATACCCTGGG CGGCTTCTCC GCGCACGCCG GACAGTCGCA GCTGTTGCAC
TGGGCCAGCC AGTTCGAGCA TCACCCCGAG CTGTATCTGG TCCACGGCGA ACTGGAAAAG
ATGCAGGCCC TGCAGCAGGC CCTGCGCGAA CGGCTGCACT GGATCGCCAA TATCCCCGAG
CCGGGGGAGC AGATCGCCCT GTAA
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| Protein sequence | MALLTFLGAI QQVTGSCYLV ESRDGARVLL ECGMHQGRRE EEDQNRSAFP FDPRSLDAVV
ISHAHLDHSG LLPRLVAEGY RGPIHATEAS CELLELMLLD SAFLQEKDAE WENRWRARQG
KPAIKPLYTI ANAEQALSQR RPHAYGVAVE VAKGVQVTFH NAGHILGSAI VEMQVEDHHL
HRHLVFSGDL GNTCSPLMQA PAQLNKADVL LMESTYGDRD HRDSEATLEE LADILQQAHR
DGGNVLIPSF AVGRTQDLIY YLGRFYQEGR LPQQAVFLDS PMAIRANAIY SRFHDQFAAA
DRAALAAKGV KRVEDWLPIL RCTATAEESM AINRIKSGAI IIAGAGMCNG GRIVHHFKHN
LWRENCHLVF PGFQAKGTLG RLIVDGAETV KVLHQRIAVK AKVHTLGGFS AHAGQSQLLH
WASQFEHHPE LYLVHGELEK MQALQQALRE RLHWIANIPE PGEQIAL
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