Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_1280 |
Symbol | |
ID | 5109096 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | + |
Start bp | 1439548 |
End bp | 1440228 |
Gene Length | 681 bp |
Protein Length | 226 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640502505 |
Product | radical SAM domain-containing protein |
Protein accession | YP_001186777 |
Protein GI | 146306312 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0602] Organic radical activating enzymes |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.281332 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 0.805859 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCTGTT TCGTCATCAC GCCCGTGGCT ACCATGCAAG AAACCCTGCG CATCACCGAG ATTTTCTACT CGTTGCAGGG GGAGACGCGT ACCGCCGGCT TGCCGACGGT GTTCGTGCGC CTGACCGGCT GCCCCCTGCG CTGTCAGTAC TGTGACACCG CCTACGCCTT CAGCGGCGGC GAGATCGTCA CGCTGGACAG CATCCTCGAT CAGGTGGCCG CCTATCGGCC GCGTTACGTC TGCGTCACTG GCGGCGAGCC GCTGGCCCAG CCCAACTGCA TCCCCTTGCT CACGCGTCTG TGCGACGCCG GTTACGAGGT GTCGCTGGAG ACCAGCGGCG CGCTCGACGT CTCGGCCGTC GACCCGCGGG TCAGCAAGGT GCTGGATCTG AAGACGCCCG GTTCGGCTGA AGTGCAGCGC AACCGTTACG AGAACATCGA GTGGCTGACC GCCAATGACC AGGTCAAGTT CGTCATCTGT TCGCGCGAGG ACTACGATTG GGCAGTGTCC AAGCTGATCC AGTACGACCT GCCGGCCCGC GCCGGCGAGG TGCTGTTCTC GCCCAGCCAC AAGCAGGTGG AAGCGCGGGC GCTGGCCGAC TGGATAGTGG CGGACAACCT GCCGGTGCGC CTGCAACTGC AACTGCACAA GATTCTCTGG AACGACGAGC CGGGACACTG A
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Protein sequence | MTCFVITPVA TMQETLRITE IFYSLQGETR TAGLPTVFVR LTGCPLRCQY CDTAYAFSGG EIVTLDSILD QVAAYRPRYV CVTGGEPLAQ PNCIPLLTRL CDAGYEVSLE TSGALDVSAV DPRVSKVLDL KTPGSAEVQR NRYENIEWLT ANDQVKFVIC SREDYDWAVS KLIQYDLPAR AGEVLFSPSH KQVEARALAD WIVADNLPVR LQLQLHKILW NDEPGH
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