| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_1279 |
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| Symbol | |
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| ID | 5109095 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 1438553 |
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| End bp | 1439365 |
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| Gene Length | 813 bp |
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| Protein Length | 270 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640502504 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_001186776 |
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| Protein GI | 146306311 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1729] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR02795] tol-pal system protein YbgF |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.131544 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 0.407975 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTGATT GCCGTCGTAT CCTGACCCTT CTGACACTCG CCCTGCCGCT TGCGGCGATG
GCGGAAGTTC CCGTACTGGA AAGCAGCTCC ATGCAACAAG GCAGCAGCTA TCCTCCGGCG
GGTTATGGTA CGGCCGGCGC CTACGCCGGA GCGGGTGCGC AAGCGCCCGC TTCAGCGCAG
GGCATGCTGT TCAATCAGCT CGAGCAGATG CAGCAGGAAA TCGCCCAGCT GCGCGGCATG
CTTGAAGAAC AGCAGAATGA AATCCAGCGC CTCAAGCAGG AAGGCCTGGA GCGTTACCAG
GATCTGGATC AACGTATTTC CTCCGGCGCC GCTGCCGGTG GAGCTCCCGC ACAGAATTCC
GCCAACGGCG CGATCAACGC CAATGGCACC CCGACGCCAC CTGCCGCTCA GCAGCAGGCC
AGCGCCGAGC CGGGCGATCC GGCCAAGGAA AAACTCTATT ACGACGCAGC CTTCGACCTG
ATCAAGGCCA AGGATTTCGA CAAGGCGTCG CAGGCATTCA CCGCCTTTCT CAACCGTTAT
CCCAACAGTC AGTACGCCGG CAACGCGCAG TACTGGTTGG GCGAAGTGAA CCTGGCCAAG
GGCGATCTGC AAGCCGCCGG TCAGGCCTTT GCCAAGGTCA GCCAGGCCTA CCCGAGCCAC
GCCAAGGTGC CGGATTCGCT GTTCAAGCTG GCCGACGTCG AGCGTCGCCT GGGCAACAAC
GACAAGGCGC GCGGCATTCT GCAGCAGGTG ATCGCCCAGT ATCCGGGCAG TTCGGCCGCG
CAGCTGGCCC AGCGCGACCT GCAGCGTCTG TAA
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| Protein sequence | MRDCRRILTL LTLALPLAAM AEVPVLESSS MQQGSSYPPA GYGTAGAYAG AGAQAPASAQ
GMLFNQLEQM QQEIAQLRGM LEEQQNEIQR LKQEGLERYQ DLDQRISSGA AAGGAPAQNS
ANGAINANGT PTPPAAQQQA SAEPGDPAKE KLYYDAAFDL IKAKDFDKAS QAFTAFLNRY
PNSQYAGNAQ YWLGEVNLAK GDLQAAGQAF AKVSQAYPSH AKVPDSLFKL ADVERRLGNN
DKARGILQQV IAQYPGSSAA QLAQRDLQRL
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