| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_1278 |
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| Symbol | |
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| ID | 5109094 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 1438046 |
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| End bp | 1438546 |
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| Gene Length | 501 bp |
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| Protein Length | 166 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640502503 |
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| Product | OmpA domain-containing protein |
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| Protein accession | YP_001186775 |
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| Protein GI | 146306310 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins |
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| TIGRFAM ID | [TIGR02802] peptidoglycan-associated lipoprotein |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.0630955 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 0.378402 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGGAAA TGCTGAAATT CGGTAAGTTC GCTGCACTGT CCCTGGCTCT CGCCGTTGCC
GTAGGTTGCT CCTCCAAAGG CGGCGACGCT GCTGGCGAAG GCGCTGTCGA CCCGAACGCT
GGCTACGGTG CCAACACTGG CGCTGTTGAT GGCAGCCTGA GCGAAGAAGC TGCTCTGCGC
GCTATCACCA CCTTCTACTT CGAGTACGAC AGCTCCGACC TGAAGGCCGA AGCCATGCGC
GCTCTGGACG TACACGCCAA GGACCTGAAA GGCAACGGCG CTCGCGTCGT TCTGGAAGGC
CACGCTGACG AGCGCGGTAC CCGTGAGTAC AACATGGCTC TGGGCGAGCG TCGTGCCAAG
GCCGTTCAGC GCTACCTGGT TCTGCAGGGC GTTTCCCCGG CTCAGCTGGA ACTGGTTTCC
TACGGCGAAG AGCGTCCGGT TGCCACTGGC AACGACGAGC AGTCCTGGGC CCAGAACCGT
CGCGTAGAGC TGCGTAAGTA A
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| Protein sequence | MMEMLKFGKF AALSLALAVA VGCSSKGGDA AGEGAVDPNA GYGANTGAVD GSLSEEAALR
AITTFYFEYD SSDLKAEAMR ALDVHAKDLK GNGARVVLEG HADERGTREY NMALGERRAK
AVQRYLVLQG VSPAQLELVS YGEERPVATG NDEQSWAQNR RVELRK
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