Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_1273 |
Symbol | |
ID | 5109089 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | + |
Start bp | 1434079 |
End bp | 1434531 |
Gene Length | 453 bp |
Protein Length | 150 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640502498 |
Product | 4-hydroxybenzoyl-CoA thioesterase |
Protein accession | YP_001186770 |
Protein GI | 146306305 |
COG category | [R] General function prediction only |
COG ID | [COG0824] Predicted thioesterase |
TIGRFAM ID | [TIGR00051] acyl-CoA thioester hydrolase, YbgC/YbaW family [TIGR02799] tol-pal system-associated acyl-CoA thioesterase |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.145521 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 0.288665 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCGCGC AAAACGGAGT CCAGCCGTTC AGTCACCGCT GCCGGGTCTA TTACGAAGAC ACCGATGCCG GTGGCATCGT CTACTACGTC AACTACCTCA AATTCATGGA GCGGGCTCGC ACCGAGCGCC TGCGTGAGCT GGGTTTTGCC CAGTCGACGC TTGCCGGTGA GGGCCTGTTG TTCGTCGTGC ATTCTGCCGA GGCGCGTTAT CACGCGCCGG CGCGCCTGGA TGACGAACTG GTGATCAGCG CCGATGTGAT CGAATTGAAC CGTGCCAGCC TGCGCTTTCG TCAACAGGTC AGGCGGGCCG CGGATGATGC GCTGCTCTGC GAAGGGCAGT TTCTGGTGGC CTGTGTGCGC GCCGACAACT TGAAACCCCG GGCTATACCC GAATCCCTGC GACACGCGTT CGCCGGGACG CAGGCGCCGG GTTTAATTGC AGCAGGAGAG TAA
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Protein sequence | MRAQNGVQPF SHRCRVYYED TDAGGIVYYV NYLKFMERAR TERLRELGFA QSTLAGEGLL FVVHSAEARY HAPARLDDEL VISADVIELN RASLRFRQQV RRAADDALLC EGQFLVACVR ADNLKPRAIP ESLRHAFAGT QAPGLIAAGE
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