| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_1260 |
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| Symbol | |
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| ID | 5109076 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 1421654 |
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| End bp | 1422931 |
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| Gene Length | 1278 bp |
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| Protein Length | 425 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 640502485 |
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| Product | outer membrane porin |
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| Protein accession | YP_001186757 |
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| Protein GI | 146306292 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0000749415 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 44 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAGTGA TGAAGTGGAG CGTAATCGCC CTGGCAGTAG CCGCGGGTAC CTCTCAGATG
GCAGTGGCTT CCAGCCAGTC CGAATCCAAA GGCTTCATTG AAGACAGCAG CTTCAACATC
TTCAATCGCG TTCTGTACCT TAACCGCGAT TTCAAGAATG GCGCTTCGAA CGGTGCAAGC
GACTCCGCTA ATCCTGCTGG CTACCGTGAA GAAACCGGCC TGGGCATCCG CCTGCTGTAC
GAGTCCGGCT TCACCCAGGG CACCGTTGGC GTCGGCTTTG ACGCACACTC TCTGAGCAGC
ATCAAACTGG ACAGCGGTCG TGGCCGCTAC GGTACTGGTC AATTTGATAA AACCAGCGAT
GGTCGCGGTG ACGACACTCA GACCGAAGTT GGCGGCGCCG TCAAGTTCCG CATTTCCGAT
ACTGTCCTGA AGTACGGCAA CCAGTTCGTC GAGAGCCCGG TATTCACCAC TGACGATAGC
CGTATTCTGC CGGAAACCGC TACCGGTACC CTGCTGACCA GCAACGAAAT CGAAGGTCTG
GAACTGACTG CAGGTCGCCT GACCGCGCTG AGCAGCCAAG TAAGCACCGA CCGCGACACC
TTCCGCCTGA AGTCGGCGAA CATCATCGGC GCCAACTACA GCTTCACCGA TAACTTCAGC
GGCGGCATTC ATGCTTCCGA CGTCGAAGAT CATTTCAAGA AGCAGTACAT CAACCTGAAC
TACAACCTGC CCGTAGCAGA AGATCAGGCT CTGAACTTCG ACCTCAACGC CTATCGCACT
AAAGATGATG GCCAGAAACT TTCCGGCGAC ATCGATAACA AGATCTGGAG CTTGGCAGTT
GCCTACGCCA TCGGCGCTCA CAAGTTCACC GTCGCTCATC AGCGTTCCTC CGGTGACAGC
GCTTATGCCT ATGGCGTCGA TGGTAACGGC ACCATCTGGC TGGCCAACTC TGTTCAGTAC
TCCGACTTCG ACCGCAAGGA CGAGCGCTCC TGGCAGGTCC GCTACGACCT GAACATGGCT
CAGTACGGCG TGCCGGGTCT GAGCTTCATG ACTCGTTACA TCTATGGTGA CAACATCGAC
ACTGGTGTTG GCGAGGAAGG TAAAGAGCAC GAGTTCAACT TCGAAACCAA GTATGTTGTT
CAGGAAGGCG CTGCCAAGGA CCTTTCGTTC CGTCTGCGTA GCTCCATCTG GCGCGCCAAC
AGCGTGCAGA ACGATGAATA CGGTGCGGAC CTCAACGATT TCCGCCTGAT CATCGACTAC
CCGCTGAGCG TTCTGTAA
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| Protein sequence | MQVMKWSVIA LAVAAGTSQM AVASSQSESK GFIEDSSFNI FNRVLYLNRD FKNGASNGAS
DSANPAGYRE ETGLGIRLLY ESGFTQGTVG VGFDAHSLSS IKLDSGRGRY GTGQFDKTSD
GRGDDTQTEV GGAVKFRISD TVLKYGNQFV ESPVFTTDDS RILPETATGT LLTSNEIEGL
ELTAGRLTAL SSQVSTDRDT FRLKSANIIG ANYSFTDNFS GGIHASDVED HFKKQYINLN
YNLPVAEDQA LNFDLNAYRT KDDGQKLSGD IDNKIWSLAV AYAIGAHKFT VAHQRSSGDS
AYAYGVDGNG TIWLANSVQY SDFDRKDERS WQVRYDLNMA QYGVPGLSFM TRYIYGDNID
TGVGEEGKEH EFNFETKYVV QEGAAKDLSF RLRSSIWRAN SVQNDEYGAD LNDFRLIIDY
PLSVL
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