Gene Pmen_1251 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_1251 
Symbol 
ID5109067 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp1411832 
End bp1412050 
Gene Length219 bp 
Protein Length72 aa 
Translation table11 
GC content63% 
IMG OID640502476 
Producthypothetical protein 
Protein accessionYP_001186748 
Protein GI146306283 
COG category[S] Function unknown 
COG ID[COG4628] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value0.814081 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value0.429328 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGCGA AAGACCCGCT CCACGGAGTC ACCCTGCAAG CCATCCTCAC CGCGCTCGTC 
GAGCGCATCG GCTGGGAAGG GCTGGCCCGG CAGGTGGACG TACGCTGTTT CAAGCATGAG
CCGAGCATCA AGTCGAGCCT GACCTTTCTG CGCAAGACGC CCTGGGCGCG GGCCAAGGTG
GAACAGCTCT ACCTGCAGCA GTTTCACCAG CAGAAATAG
 
Protein sequence
MTAKDPLHGV TLQAILTALV ERIGWEGLAR QVDVRCFKHE PSIKSSLTFL RKTPWARAKV 
EQLYLQQFHQ QK