| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_1245 |
|---|
| Symbol | |
|---|
| ID | 5109061 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas mendocina ymp |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009439 |
|---|
| Strand | + |
|---|
| Start bp | 1405006 |
|---|
| End bp | 1406157 |
|---|
| Gene Length | 1152 bp |
|---|
| Protein Length | 383 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 640502470 |
|---|
| Product | major facilitator transporter |
|---|
| Protein accession | YP_001186742 |
|---|
| Protein GI | 146306277 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG2807] Cyanate permease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 37 |
|---|
| Fosmid unclonability p-value | 0.356347 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCTCGGG CCTTGCTATT GATGGCTCTG GTGCTGGCGG CGATCAACCT GCGCCCCGGC
ATCACCTCCC TTGCTCCGCT GATCGAGCGG ATTGCCACCG AGCTGTCGCT GAGCCGCAGC
TTCATCAGCC TGACCACCGC GCTGCCGGTA CTGTGCATGG GCCTGCTTGC TCCGCTGGCG
CCGCGTCTGG CCCTGCGCTG GGGCCTGGAG CGCACCATAG TGCTGTGTCT GGGGTTGGTC
AGCCTGGCCC TGCTGGCGCG CCTGGCGGCG CATCAGAGCG CCGTACTGAT CGGCAGTGCC
ATCGCTCTCG GTGCCGCCAT CGCCGTCGCC GGGCCCTTGC TCTCGGGTTT CATCAAACGC
TACTTCTCCG GCCAGATGGG CCGCGTGGTG GGGTGGTATT CGCTCGGCAT GGCCATCGGC
GGCGCCGGCG GTGCGGTGCT CACGGCGCCG GCGACCAGCC TGTTCGGCGA TGCCTGGCAT
CTGGGCCTGG CGATCTGGGC GCTGCCCGCT GCGCTGGCCG TGCTGCTCTG GCTCTACCTG
CCCAACCAGG TGGGCAGCGG CGAAGCGCAG GAGGGCGGTC TACCCTGGCG ACAGCCGCGT
GCCTGGCTGA TCAGCGGTTT CTTCGCCCTG CAGGCGGGGC TGTTCTACGC CCTGGCGACC
TGGGTGGTGG CGCGCTATCA CGAAGCCGGG CTGAGTCTGC TGCGCAGCAA CTCGCTGCTG
AGCATTTCCA TGCTGATGGG CTTGCCCAGC TCCTTCCTGC TGCCCTGGCT GGCGCAGCGC
TTCGATGCGC GCTATCCACT GCTGCTGGCC TGTGGGGCGC TGAGCAGCCT GTGCCTGGCG
ATGATCAGCT TTGCGCCGAC CCTGTTGCCT GAGCTCTGGG CACTGCTGAT CGGTTTCGGC
CTCGGTGGCT CGTTCGCGCT GTCGCTGGTG CTGCCGCTTT ACGAGGCCGG CTCGCCGCTG
GCGGTCAGCC GCTGGACCGC GATGATGCTG TTCACCGGCT ATTGCCTGGC CTGCATGACG
CCGATACTCA CCGGCCTGGC GCGCGATCTG TCCGGCAGCT ATCGCCTGCC GTTCGCGGTA
CTGACCGCTC TGGCCCTGCT GATGACGCTG GTGGCCTGGT TGCTCGGGCG CAGCCAGCGG
CGCTCGCGTT GA
|
|---|
| Protein sequence | MPRALLLMAL VLAAINLRPG ITSLAPLIER IATELSLSRS FISLTTALPV LCMGLLAPLA
PRLALRWGLE RTIVLCLGLV SLALLARLAA HQSAVLIGSA IALGAAIAVA GPLLSGFIKR
YFSGQMGRVV GWYSLGMAIG GAGGAVLTAP ATSLFGDAWH LGLAIWALPA ALAVLLWLYL
PNQVGSGEAQ EGGLPWRQPR AWLISGFFAL QAGLFYALAT WVVARYHEAG LSLLRSNSLL
SISMLMGLPS SFLLPWLAQR FDARYPLLLA CGALSSLCLA MISFAPTLLP ELWALLIGFG
LGGSFALSLV LPLYEAGSPL AVSRWTAMML FTGYCLACMT PILTGLARDL SGSYRLPFAV
LTALALLMTL VAWLLGRSQR RSR
|
|---|
| |