| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_1242 |
|---|
| Symbol | |
|---|
| ID | 5109058 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas mendocina ymp |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009439 |
|---|
| Strand | - |
|---|
| Start bp | 1403095 |
|---|
| End bp | 1403316 |
|---|
| Gene Length | 222 bp |
|---|
| Protein Length | 73 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 640502467 |
|---|
| Product | membrane protein-like protein |
|---|
| Protein accession | YP_001186739 |
|---|
| Protein GI | 146306274 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3205] Predicted membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 40 |
|---|
| Fosmid unclonability p-value | 0.582249 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTCAAGA CCCTGACCTT CACCATCATG CACTTCTGCA TCGCCTTCAG CGTCGCTTAC
GTTTTGACCG GCAGCATTGC CGTGAGCGGC CTGGTCGCCG CGGTGGAGCC GCTGTGCAAT
TCGGTGGGCT TCTACTTCCA CGAGAAGATC TGGGCCCGCC TGGAAGCGAA GAAGCGCGCC
AGCAGCATTC CCAAGCATGC CTGGTTGCAC CATCAGGCCT GA
|
|---|
| Protein sequence | MLKTLTFTIM HFCIAFSVAY VLTGSIAVSG LVAAVEPLCN SVGFYFHEKI WARLEAKKRA
SSIPKHAWLH HQA
|
|---|
| |