Gene Pmen_1234 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_1234 
Symbol 
ID5108735 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp1395290 
End bp1396105 
Gene Length816 bp 
Protein Length271 aa 
Translation table11 
GC content63% 
IMG OID640502459 
Productseptum site-determining protein MinD 
Protein accessionYP_001186731 
Protein GI146306266 
COG category[D] Cell cycle control, cell division, chromosome partitioning 
COG ID[COG2894] Septum formation inhibitor-activating ATPase 
TIGRFAM ID[TIGR01968] septum site-determining protein MinD 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.246291 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value0.269828 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGCCAAGA TCCTCGTAGT CACTTCCGGC AAGGGTGGCG TCGGTAAAAC CACCACCAGC 
GCTGCCATCG GTACCGGCCT CGCCCTGCGC GGCCACAAGA CCGTCATCGT CGACTTCGAC
GTCGGCCTGC GTAACCTCGA CCTGATCATG GGCTGCGAAC GCCGCGTGGT GTACGACTTC
GTCAACGTGG TCAACGGCGA AGCCACCCTG ACCCAGGCCC TGATCAAGGA CAAGCGCCTC
GAGAACCTTT ACGTGCTGGC CGCCAGCCAG ACCCGTGACA AGGACGCGCT GACCCAGGAA
GGCGTCGAGA AGGTCATCGC CGAGCTGTCG CAGAACTTCG AGTTCGTGGT CTGCGACTCC
CCGGCCGGTA TCGAGAAAGG TGCCCACCTG GCGATGTACT TCGCCGACGA GGCCATCGTC
GTGACCAACC CGGAAGTTTC CTCGGTACGC GACTCCGACC GCATGCTCGG CCTGCTGGCG
AGCAAATCGC GCCGCGCCGA GAAAGGCGAG GAGCCGATCA AGGAGCACCT GCTGCTGACC
CGCTACAACC CCGAGCGTGT CACCAAGGGC GAAATGCTCG GCGTCGAAGA CGTCGAGGAA
ATCCTCGCCA TCCGCCTGCT CGGCGTGATC CCAGAATCCC AGGCCGTGCT CAAGGCTTCC
AACCAGGGTA TTCCGGTCAT CCTCGATGAC CAGAGCGACG CTGGTCAGGC CTATAGCGAC
GCAGTCGATC GCCTGCTTGG CAAGGACGTG CCGCACCGCT TCCTGGACGT GAAGAAGCAG
GGCTTCCTGC AGCGCCTGTT TGGAGGTCGA GAATGA
 
Protein sequence
MAKILVVTSG KGGVGKTTTS AAIGTGLALR GHKTVIVDFD VGLRNLDLIM GCERRVVYDF 
VNVVNGEATL TQALIKDKRL ENLYVLAASQ TRDKDALTQE GVEKVIAELS QNFEFVVCDS
PAGIEKGAHL AMYFADEAIV VTNPEVSSVR DSDRMLGLLA SKSRRAEKGE EPIKEHLLLT
RYNPERVTKG EMLGVEDVEE ILAIRLLGVI PESQAVLKAS NQGIPVILDD QSDAGQAYSD
AVDRLLGKDV PHRFLDVKKQ GFLQRLFGGR E