| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_1229 |
|---|
| Symbol | |
|---|
| ID | 5108730 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas mendocina ymp |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009439 |
|---|
| Strand | + |
|---|
| Start bp | 1391618 |
|---|
| End bp | 1392037 |
|---|
| Gene Length | 420 bp |
|---|
| Protein Length | 139 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 640502454 |
|---|
| Product | globin |
|---|
| Protein accession | YP_001186726 |
|---|
| Protein GI | 146306261 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2346] Truncated hemoglobins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 0.435049 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 0.149006 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCCTGG CCATGCTCTG CCTGCCGCTG CTGCTGGCGG CCTGCGCCCA GCAGGCGCCG
CGCGACGACG GCCTGTACCG CGCCCTGGGC GAGGAGCCCG GTATCGTGCG GATCGTCGAA
GGCATGCTGC TGGGCTCCGC GCGTGATCCG CGCATCGCCC GGCACTTTCT CGACATCGAC
ATCGAGCGTC TGCGCGAGAA GCTGATCGAG CAGCTGTGCT TCGAGAGCGG CGGCCCCTGC
GTCTACACCG GCGACAGTAT GGAGGAGAGC CACAAGGGCA TGCGCCTGAC CCCCAGCGAC
TTCAACGCCC TGGTCGAGCA CCTGCAGGAC GCCATGGAGG CCGAGGGCGT GCCGACGCCG
GCGCAGAACC GCCTGCTGGC GCGCCTGGCG CCGATGCGCG GGCAGGTGAT CGACCGTTAG
|
|---|
| Protein sequence | MRLAMLCLPL LLAACAQQAP RDDGLYRALG EEPGIVRIVE GMLLGSARDP RIARHFLDID
IERLREKLIE QLCFESGGPC VYTGDSMEES HKGMRLTPSD FNALVEHLQD AMEAEGVPTP
AQNRLLARLA PMRGQVIDR
|
|---|
| |