| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_1225 |
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| Symbol | |
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| ID | 5108726 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 1386863 |
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| End bp | 1387612 |
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| Gene Length | 750 bp |
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| Protein Length | 249 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640502450 |
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| Product | AraC family transcriptional regulator |
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| Protein accession | YP_001186722 |
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| Protein GI | 146306257 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.615855 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.0441463 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGCAAG CCCGTGTGAT TCGCCTGGAT GAACAGGCCC ATGAACATGC TCACGATCAT
CACCAACTGG TGATGTCCCT GGTTGGCCGC GCCGAATTCG AGGTTGGCGG ACGCGGCGGC
GAAGTCTGCC GGATGCGCGC CTGTCTGGTG CCGGGCGACG CCGCTCACCA GTTCGCCGGC
ATGGGCGACA ACCGCATGCT GATCGTCGAT CTCGACGAGC AGGACACCCC CAGCGAGGAC
TTGGAACTGC TTCATAGCCT GTTCGAGACC CCGCGATTCC CGGCGCTGGA CGCCGATTTC
CAGCACCTGC TCAGTTATGC CGGCGCCGAA CTGGAGCGCT ACGGCAGCGA CTCCATCCTG
GCGCGCTCTC TCGGCGGCGT GCTGTTGCGC GCTCTGCACC TGCGTCTGTT TGGCGAACAG
CGGCGCCAGC CGCAGGGAGC GCTGGATCTG CAGCGGCTGG ACAGCTACAT CGGCGAGCAC
CTGGCGCGGC GCATCAGTGT GGCCGAGCTG GCTCAGGTGA TGTGCCTGAG CCCCAGCCAC
TTCCATGCGC AGTTCAAGGA CAGCGTCGGC CTCACCCCGC ACCAGTACCT GCTCAAGACC
CGCCTCGACC GCGCCGCGCG CATGCTGCGC GAGAGCACCC TGCCGCTGGT GCGCATCGCC
GAGGAGTGCG GGTTCTCCAG CCAGAGCGCA TTGACCACCT CCATGCGCCG CTATCTCGGC
CTCACGCCCA AACGTTTGCG CAGCGAGTAA
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| Protein sequence | MLQARVIRLD EQAHEHAHDH HQLVMSLVGR AEFEVGGRGG EVCRMRACLV PGDAAHQFAG
MGDNRMLIVD LDEQDTPSED LELLHSLFET PRFPALDADF QHLLSYAGAE LERYGSDSIL
ARSLGGVLLR ALHLRLFGEQ RRQPQGALDL QRLDSYIGEH LARRISVAEL AQVMCLSPSH
FHAQFKDSVG LTPHQYLLKT RLDRAARMLR ESTLPLVRIA EECGFSSQSA LTTSMRRYLG
LTPKRLRSE
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