| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_1218 |
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| Symbol | |
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| ID | 5108719 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 1378239 |
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| End bp | 1379795 |
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| Gene Length | 1557 bp |
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| Protein Length | 518 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640502443 |
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| Product | galactarate dehydratase |
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| Protein accession | YP_001186715 |
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| Protein GI | 146306250 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2721] Altronate dehydratase |
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| TIGRFAM ID | [TIGR03248] galactarate dehydratase |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.0502126 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.0293032 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGTTGA TTCCCCATCA GGATTCGCCC CGTTACATCC GCCTGCACCC GAGTGACAAC
GTTGGCGTGG TGGTCAATGA CCAGGGCGTC GCCGCTGGCG GCCAGTTCGA CGATGGCCTG
ACGGCTATCG AAGGCATTCC GCAGAGCCAC AAGGTGGCGC TGGTGGATAT CGCCGAAGGG
CAAGAAGTGG TGCGCTATGG CGAGGTCATC GGCTATGCGC TGAAACCCAT CGCCGCCGGC
AGCTGGGTCA CCGAGCAGGT GTTGCGCATG CCCGAGCCGC CGGCACTGGA CAACCTGCCC
AGGGCGACGA TCAAGGCCGC GCCCGGCGAG CCGCTGGAAG GTTATACCTT CGAGGGTTTC
CGCAACCCGG ACGGCAGCGT CGGCACCCGC AATATCCTCG GCGTGACCAC CACCGTGCAG
TGCGTGGTCG GCGTGCTCGA TCACGTGGTC GAGCGCGTGC GCAAGGAAGT CCTGCCCAAA
TACCCCAATG TCGACGACGT GGTGGCGCTG TCGCACAGCT ATGGCTGCGG CGTGGCGATC
AATGCGCCGG ACGCCGTGGT GCCGATCCGC ACCCTGTACA ACATCAGTCG CAACCCCAAC
CTCGGCGGCC AGGCGCTGGT GATCAGCCTC GGCTGCGAGA AACTGCAGGC CAATCAGTTG
ATGGACGGCG ATGCGCTGAC CAACGGCCTG GACGAGGAAG ACTGGCTATT CCGCCTGCAG
GATTCCGGCA GCGGATTCGC CGGCATGGTC GAGCAGATCA TGGGCATGAT CGAGGACCGT
CTGCAGGTGC TCGACCAGCG TCGCCGCGAG ACCGTGCCGG CGTCCGAGCT GGTGGTTGGC
ATGCAGTGTG GCGGCAGCGA TGCCTTCTCC GGCATCACCG CCAACCCGGC CCTGGGCGTG
GCCGCCGACC TGCTGGTGCG CGCCGGCGCC ACCGTGATGT TCTCCGAGAA CACCGAAGTG
CGTGACGGTA TTCACCTGCT CACGCCGCGC GCCGCCAGCG TCGAGGTCGC CGATGCGCTG
ATCCGCGAGA TGGACTGGTA CGATGCCTAC CTTTCGCGCG GCATGGCTGA TCGCAGCGCC
AACACCACCC CGGGCAACAA GAAGGGCGGG CTGAACAACA TCGTCGAGAA GGCCATGGGT
TCCATCGCCA AGTCCGGCAG CAGCCCGATT GCCGGCGTCG CCTCCCCGGG CGAGCGCATT
CGTGGCAAGG GCCTGTGGTT CTGCGCCACG CCGGCCAGCG ACTTTATCTG CGGCACCCTG
CAACTGGCGG CGGGCATGAA CCTGCACATC TTCACCACCG GCCGTGGCAC GCCCTATGGC
CTGTCGATGG TGCCGGTGAT CAAGGTGGCC ACGCGCAGCC AACTGGCCGA GCGTTGGCCG
GATCTGATCG ACGTCGACGC CGGGCAGATC CTCTCCGGAC GCATGAGCCT GGAGGAAATG
GGCTGGCATA TCTTTCAGCT CTATCTGGAC GTGGCCAGCG GGCGCAGGCA GACCTGCGCC
GAACGCCTGC GTCTGCATAA CGATCTGGTG CTATTCAACC CGGCGCCGGT GACCTGA
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| Protein sequence | MQLIPHQDSP RYIRLHPSDN VGVVVNDQGV AAGGQFDDGL TAIEGIPQSH KVALVDIAEG
QEVVRYGEVI GYALKPIAAG SWVTEQVLRM PEPPALDNLP RATIKAAPGE PLEGYTFEGF
RNPDGSVGTR NILGVTTTVQ CVVGVLDHVV ERVRKEVLPK YPNVDDVVAL SHSYGCGVAI
NAPDAVVPIR TLYNISRNPN LGGQALVISL GCEKLQANQL MDGDALTNGL DEEDWLFRLQ
DSGSGFAGMV EQIMGMIEDR LQVLDQRRRE TVPASELVVG MQCGGSDAFS GITANPALGV
AADLLVRAGA TVMFSENTEV RDGIHLLTPR AASVEVADAL IREMDWYDAY LSRGMADRSA
NTTPGNKKGG LNNIVEKAMG SIAKSGSSPI AGVASPGERI RGKGLWFCAT PASDFICGTL
QLAAGMNLHI FTTGRGTPYG LSMVPVIKVA TRSQLAERWP DLIDVDAGQI LSGRMSLEEM
GWHIFQLYLD VASGRRQTCA ERLRLHNDLV LFNPAPVT
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