Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_1199 |
Symbol | |
ID | 5108700 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | - |
Start bp | 1353908 |
End bp | 1355548 |
Gene Length | 1641 bp |
Protein Length | 546 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640502424 |
Product | sodium/hydrogen exchanger |
Protein accession | YP_001186696 |
Protein GI | 146306231 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG4651] Kef-type K+ transport system, predicted NAD-binding component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.399558 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 48 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCCTGT TTCAGGAAAT CGCCGCCCTG CTCGCCCTGT CCGCCCTGTT CGGGGTGATC GCCGTCCACC TGCGTCAGCC CCTGATCATC GCCTACATCC TGGTCGGCAT CCTGGCCGGC CCGGCGGTGA TGAACCTGTC GGGCGACCAT ACCTCGCTCG GTCTTTTGGC CGAAATCGGG ATTACCGTGC TGCTGTTCGT GGTCGGCCTG AAGCTGGACA TGCGCCTGGT GCGCACCCTC GGCCCGGTAG CCCTGGCCAC CGGGCTGGGG CAGCTCACCT TCACCATCCT GTTCGGCCTG CTGCTGTGCC GGATGCTGGG GCTGGACTGG CTGACCGCGA CCTACGTGGC GGTGGCGCTG ACCTTCTCCA GCACCATCAT CATCGTCAAG CTGCTCTCGG ACAAGGGCGA GATCGACTCG CTGCACGGGC GCATCGCCAT GGGTTTTCTC ATCGTGCAGG ACATCGCCGT GGTCCTGGCC ATGCTGGCGA TCAACCTGTA CCAGCCGGCC AACGGCGAGC ATCAGGGGCT GTCGCCGCTG GCCCTGATCA CGGTCCTGCT GTGCAGCCTG GTTCTGCTCT ACCTGCTGAT ACGCCATGTG TTGCCGCGCC TGCTCGGCGC CATGGCCCGC TCGCCGGAGC TGCTGATGCT GGTGGCCATC GCCTGGGGCA CCCTGCTCGC GGGCGGCGCC GAGGCGCTGG GCCTGTCCAA GGAGATCGGC GCCTTCATCG CCGGCTTCTG CCTGGCGTCG ACGCCCTTGC GCGAGGCGAT CGCCAGCCGC CTGACCAGCC TGCGCGACTT CCTCCTGCTG TTCTTCTTCC TGCATCTGGG CATCCAGCTG GATTTCACCT ACCTTCAGGG CCAACTGGGC AGCGCCCTGC TGCTATCGGT GTTCGTGCTG ATCGGCAATC CGCTGATCGT CATGGCCATC ATGGGCGCGA TGGGCTACCG CAAGCGCACC GGTTTCATGG CCGGGCTGAC CGTGGCACAG ATCAGCGAGT TCTCCATCAT CTTCGTCGCC ATGGGCATCG GCCTTGGCCA TGTCGGCGGC GAAGCCCTGG GGCTGACCAC CCTGGTAGGG GTGATCACCA TCACCCTGTC CACCTACATG ATTCTCTACT CGCAGCCGCT GTTCGAACGC CTGTCGCCCT GGCTGGGGCT GTTCGAACGA CGCGTGGCGC ACCGGGAGAA CGCCGCCGAC AGCAGCGCGG AGGAGGAGCA ACCGGAGGTC ATCGTCTATG GCCTGGGCCG CTACGGTCGC CAGCTGGCGC ACCGCCTGGA GGACGCCGGG CTGCGCGTGC TCGGCGTCGA TTTCAACCCC GAAGCCCTGG CCAGTGCGCG GCGCAGCGGC CTGACGGTGT GCTATGGCGA CGCCGAGGAT CACGACTTCA TTACCCACCT GCCGCTGCAG CAGGCGCGCG CACTGGTCAG TACCATTCCG CAGCGCGAGG TCAACGCCAT CCTCCTGCGC GCGGCGCGCA GCACCGGCTT TCGCGGCCAG GTCACGCTCA GCGCCTTCCG CGAGGGCGAT CTGGAAGCCT TCACCCGCGC CGGTGCGGCC AGCGTGCTGC AGCCCTACAT AGATGCAGCC GACTCGGCCG CCAGGCGCCT GCTGGAAGAG GTCGGCCAGC CCCTTACCTG A
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Protein sequence | MSLFQEIAAL LALSALFGVI AVHLRQPLII AYILVGILAG PAVMNLSGDH TSLGLLAEIG ITVLLFVVGL KLDMRLVRTL GPVALATGLG QLTFTILFGL LLCRMLGLDW LTATYVAVAL TFSSTIIIVK LLSDKGEIDS LHGRIAMGFL IVQDIAVVLA MLAINLYQPA NGEHQGLSPL ALITVLLCSL VLLYLLIRHV LPRLLGAMAR SPELLMLVAI AWGTLLAGGA EALGLSKEIG AFIAGFCLAS TPLREAIASR LTSLRDFLLL FFFLHLGIQL DFTYLQGQLG SALLLSVFVL IGNPLIVMAI MGAMGYRKRT GFMAGLTVAQ ISEFSIIFVA MGIGLGHVGG EALGLTTLVG VITITLSTYM ILYSQPLFER LSPWLGLFER RVAHRENAAD SSAEEEQPEV IVYGLGRYGR QLAHRLEDAG LRVLGVDFNP EALASARRSG LTVCYGDAED HDFITHLPLQ QARALVSTIP QREVNAILLR AARSTGFRGQ VTLSAFREGD LEAFTRAGAA SVLQPYIDAA DSAARRLLEE VGQPLT
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