| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_1193 |
|---|
| Symbol | |
|---|
| ID | 5108694 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas mendocina ymp |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009439 |
|---|
| Strand | - |
|---|
| Start bp | 1346509 |
|---|
| End bp | 1347735 |
|---|
| Gene Length | 1227 bp |
|---|
| Protein Length | 408 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 640502416 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001186690 |
|---|
| Protein GI | 146306225 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1690] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 52 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCAACA AGACCTACAA CCTGCTGGAA GTCGCAGGTG GCAAGCCGAT CAAGCTGTGG
ACGCAAGGCG TTCCGGTGGA GGAAGACGCC AAACAGCAAT TGATGAACAC CGCGAAGATG
CCCTTCATCT TCAAGCACCT GGCCGTGATG CCGGACGTGC ACCTGGGTAA GGGCTCGACC
ATCGGCAGCG TGATCCCCAC GGTCGGCGCC ATCATCCCGG CCGCAGTCGG GGTGGATATC
GGCTGCGGCA TGATCGCTGC GCGCACCTCG CTGATGGCGC ACGACCTGCC GGACAGCCTG
GCCGGCCTGC GCGCCGCCAT CGAGAAGGCC GTGCCGCACG GGCGCAGCAA CACGCGCGCC
GGTCGCGACC GGGGTGCCTG GGAAAACGTG CCGGAGATGG CCGACCACGC CTGGTCGGCG
CTGAGCAAGC GCTTCAAGGC CATCACCGAC AAGTACCCGC GTTTGGAGAA AACCAACAAC
CGCAAGCACC TGGGAACCCT GGGTACCGGC AACCATTTCA TCGAGGTCTG CCTGGATGAA
GCAGGCCGCG TCTGGTTCAT GCTGCACAGC GGCTCGCGCG GCGTGGGTAA TGCCATCGGC
AACCTATTCA TCGAACTGGC CCAGGCCGAT ATGCGCCAGC ACATCGCCAA CCTGCCGGAC
CGCGACCTGG CCTACTTCGA GGAAGGTAGC CAGCACTTCG ATGACTATGT GGAGGCCGTG
GGCTGGGCGC AGGACTTCGC CAAGCAGAAC CGCGCACTGA TGATGCACGC AGTGATCACG
GCGGCACGCG GCGTGATCGC CAAACCGTTC GAGGTGGCCC TGGAGGCAGT GAACTGCCAC
CACAACTACG TGCAGAAGGA ACGTCACTTC GGTGAAGAGG TGCTGGTCAC CCGTAAAGGC
GCGGTGTCGG CGAAGAAGGG CGAACTGGGC ATCATCCCCG GCTCCATGGG CGACAAGAGC
TACATCGTGC GCGGCCTGGG TAACGAGGAG GCGTTCTGCT CCTGCAGCCA CGGCGCTGGG
CGCACCATGA GCCGGACCAA GGCGAAGAAG GTCTTCACCA TCGAAGACCA GATCCGCGCC
ACGGCTCATG TGGAATGCCG CAAGGACGCC GATGTGATCG ACGAAATTCC GATGGCCTAC
AAGGACATCG ACCAGGTAAT GGACGCCCAG CGTGAGCTGG TGGAAGTGGT GCACACCCTG
CGTCAGGTGG TGTGCGTGAA AGGCTAG
|
|---|
| Protein sequence | MSNKTYNLLE VAGGKPIKLW TQGVPVEEDA KQQLMNTAKM PFIFKHLAVM PDVHLGKGST
IGSVIPTVGA IIPAAVGVDI GCGMIAARTS LMAHDLPDSL AGLRAAIEKA VPHGRSNTRA
GRDRGAWENV PEMADHAWSA LSKRFKAITD KYPRLEKTNN RKHLGTLGTG NHFIEVCLDE
AGRVWFMLHS GSRGVGNAIG NLFIELAQAD MRQHIANLPD RDLAYFEEGS QHFDDYVEAV
GWAQDFAKQN RALMMHAVIT AARGVIAKPF EVALEAVNCH HNYVQKERHF GEEVLVTRKG
AVSAKKGELG IIPGSMGDKS YIVRGLGNEE AFCSCSHGAG RTMSRTKAKK VFTIEDQIRA
TAHVECRKDA DVIDEIPMAY KDIDQVMDAQ RELVEVVHTL RQVVCVKG
|
|---|
| |