Gene Pmen_1192 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_1192 
Symbol 
ID5108693 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp1345681 
End bp1346469 
Gene Length789 bp 
Protein Length262 aa 
Translation table11 
GC content66% 
IMG OID640502415 
Productnucleotidyltransferase-like protein 
Protein accessionYP_001186689 
Protein GI146306224 
COG category[R] General function prediction only 
COG ID[COG3541] Predicted nucleotidyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones52 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGTGA TGGAAAACCA CCCGCTCAGC AGCGCCATGC GCACACGGGT GCAGGAAGAA 
CTCGAACGAC TCGAGCGCGA GCGCAACGTC AAGGTGCTTT ATGCCTGCGA ATCGGGCAGC
CGCGCCTGGG GCTTTGCCTC GCCAGACAGC GATTACGACG TGCGCTTCGT CTATGTGGAA
AAACCCGACT GGTTCGTCCA GGTGGACGCG CCGCGCGACG TGATCGAACG CCCGCTGGAC
GACGAGCTGG ACGTCAGCGG CTGGGAGCTG CGCAAGACCC TCGGCCTGCT GCGCAAGTCC
AACCCGACGC TGCTGGAATG GCTCGACTCG CCGCTGGTAT ATCGCCAGGA AGACCAGGCG
ACGGCGCGCC TGCGCCAGCT GGCCGAGGCG TTCTACAGCC CGCCGGCAGC GCGCAACCAC
TACCTGTCGA TGGCCAGGAA GAACTTTCGC GGCTACCTGC AGGGCGACTC GGTGCGTTTG
AAGAAGTACT TCTACGTACT GCGCCCGCTG CTCGCCGTGC GCTGGATCGA CCAGGGCCGC
GGCCGGCCGC CGATGACCTT CGCCAACCTG CTGCAGACGG TGGACGACTT TGCGCTGCTG
GCAGAGGTGG AAGAGCTGCT GGTGCTCAAG CGCAGCGCCG ACGAGTCCGC CTACGGCCCG
CGCCGCCCTG CCCTGCATGC GTTCATCGAA ACACAGCTGC AGCAGCCGGT ACCGAGCCTG
CCGCGCACCC GGGCGGACAG CGGCCTGCTC GACGCCTACC TGCGCGAGAC GGTACAACGC
TACGCCTGA
 
Protein sequence
MNVMENHPLS SAMRTRVQEE LERLERERNV KVLYACESGS RAWGFASPDS DYDVRFVYVE 
KPDWFVQVDA PRDVIERPLD DELDVSGWEL RKTLGLLRKS NPTLLEWLDS PLVYRQEDQA
TARLRQLAEA FYSPPAARNH YLSMARKNFR GYLQGDSVRL KKYFYVLRPL LAVRWIDQGR
GRPPMTFANL LQTVDDFALL AEVEELLVLK RSADESAYGP RRPALHAFIE TQLQQPVPSL
PRTRADSGLL DAYLRETVQR YA