| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_1177 |
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| Symbol | |
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| ID | 5108678 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 1326013 |
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| End bp | 1329159 |
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| Gene Length | 3147 bp |
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| Protein Length | 1048 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640502399 |
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| Product | CzcA family heavy metal efflux protein |
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| Protein accession | YP_001186674 |
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| Protein GI | 146306209 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG3696] Putative silver efflux pump |
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| TIGRFAM ID | [TIGR00914] heavy metal efflux pump (cobalt-zinc-cadmium) |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 49 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTGAGC GCATCATTCA ATTCGCCATA GAACAGCGTT TTCTGGTGCT GTTGGCCGTT
TTGGCGATGG CCGGTGTGGG CGTGGCCAGC TATCAGAAGC TGCCGATCGA CGCCGTTCCC
GACATCACTA ACGTCCAGGT ACAGATCAGT ACCGCTGCCG AGGGCTTTTC GCCGCTGGAA
ACCGAGCAGC GCATCACTTT CCCGATCGAA ACGGCCATGG CCGGCCTGCC GCATTTGAAA
CAGACCCGCT CGCTGTCACG CTCGGGGCTA TCGCAGGTTA CCGTGATTTT TGAGGATGGC
ACGGATCTGT ATTTCGCCCG CCAGTTGGTC AACGAGCGAC TGCAAAGCGC CAAGGAGCAA
TTGCCCGAGG GTGTCGAGGC CTCCATGGGG CCGATTTCCA CCGGCCTAGG TGAAATCTTT
CTATGGACGG TCGAGGCCGA GGAGGGGGCA CTCAAGGAGG ACGGTACGCC TTACACACCA
ACCGATCTGC GGGTGATCCA GGACTGGATC ATCAAACCGC AGTTGCGCAC GGTGCCTGGC
GTTGCCGAAA TCAACACCAT TGGTGGCTTC GCCAAGGAGT TCCAGGTCGC TCCAGATCCC
AAGCGCTTGG CGGCCTACAA GCTGACGCTG GGTGACCTGC TGCTGGCGCT GGAGCGCAAC
AATGCCAACG TCGGTGCTGG CTATATCGAG CGCAATGGCG AGCAACTACT GATTCGGGCA
CCTGGGCAAC TGAGCACGCT GGACGATATC GCCAATATCG TCGTGGCCAA TGTGGACGGC
ACGCCCATTC GGGTTAGTCA TGTGGCGCAG GTGATGTTGG GCCGTGAACT ACGTTCTGGT
GCTGCGACCG AGAATGGTCG CGAGGTCGTG CTGGGAACAG TGTTTATGCT GATCGGCGAG
AACAGCCGCA GTGTGTCGCA GGCCGTGGCC GCACGTCTGG AGGAGATCAA CCGTTCGCTG
CCTGAAGGGG TGGTTGCGGT GACCGTCTAT GACCGCACCA ATCTGGTGGA CAAGGCCATC
GCCACGGTCA AGAAGAACCT GATCGAAGGG GCTATCCTGG TCATCGTCAT CCTCTTCCTG
TTCCTCGGTA ACATCCGTGC GGCGCTGATC ACAGCCATGG TCATTCCGCT GTCGATGCTG
TTCACCTTCA CCGGCATGTT CAGCAACAAG GTCAGCGCCA ACTTGATGAG TCTGGGGGCA
CTCGACTTCG GCATCATCGT CGATGGTGCC GTGGTCATCG TCGAGAACGC TATTCGCCGT
CTGGCTCATG CGCAGCACAA GCTTGGCCGC GAGCTGACCC GTAGTGAGCG TCTGCATGAG
GTCTTCGCGG CATCCAAGGA AGCGCGTCGT GCGCTGATTT TCGGTCAGTT GATCATCATG
GTGGTGTACC TGCCGATCTT CGCCCTGACC GGGGTCGAGG GCAAAATGTT CCACCCAATG
GCCTTCACCG TGGTGACCGC CCTGTTCGGG GCCATGATCC TTTCGGTGAC CTTCGTCCCG
GCGGCTATCG CGCTATTCGT CACTGGTAAG GTGAAAGAAG AGGAAAACGC GCTGATGCGT
GTTGCCCGGC GCACCTACGA GCCAGTGCTG GCCTGGGTCA TGCGACGGCG TACGTTGGCC
TTCAGTGCGG CCGTGGCGCT GGTTCTGTTC TCCGGTCTGC TGGCATCACG TATGGGCAGC
GAGTTCGTGC CTAGCCTCAG TGAGGGGGAC TTCGCGCTGC AGGCGCTGCG TGTACCGGGT
ACCAGCCTGA CGCAGTCGGT GGAGATGCAG ATGCGCCTGG AGGAGACCAT TCTGGCCAAG
GTGCCGGAAG TGGAGCGAGT ATTCGCGCGT ACCGGTACGG CGGAAATCGC CTCCGACCCG
ATGCCGCCGA ACATTTCTGA CAGCTACGTG ATGCTCAAAC CGCGCGATCA ATGGCCCGAT
CCGAAAAAGT CGCGTGATGC TCTGATCGCC GAGCTGCAGG CCGCTGCCGA GTTGGTTCCG
GGCAGTAACT ACGAGCTGTC GCAGCCTATT CAGTTGCGTT TCAACGAATT GATATCGGGT
GTGCGCAGCG ATGTCGCGGT GAAGATATTC GGCGACGATA TGGACGTTCT CAATAGCACG
GCAGCCGAAG TGGCCGAAAC CCTAGGCGGT ATTGATGGGG CGTCCGAGGT GAAGGCCGAG
CAGACAACGG GTCTTCCGGT GCTGACCGTG GCCATCGACC GAGACAAGGC GGCTCGCTAT
GGTCTGAATG TCGGTGACAT TCAGGAAACT GTCGCCGTGG CTGTTGGTGG GCGCCGGGCG
GGAACGCTGT TCGAGGGGGA TCGCCGTTTC GATCTGGTAG TACGTCTACC GGAGAACCTG
CGTACCGATA TCGAGGGGCT TTCGCGACTG CTGATACCCG TTCCAGCAAC GGGGGCAGCC
ACCAGCGTCG GCTTTATCGC GCTCTCCGAA GTGGCCAGTC TGCAACTGGC GCCAGGGCCA
AACCAGGTCA GCCGCGAGAA TGGCAAGCGC CTGGTTGTGG TGAGTGCCAA CGTGCGAGGG
CGTGACATCG GATCCTTTGT GCAAGAAGCC GAAGAGAGGA TTCGCAGCGA TGTGAAGCTG
CCAGCCGGTT ATTGGACGAC CTGGGGCGGA CAGTTCGAGC AGCTGCAATC GGCAGCCAAA
CGCCTGCAAG TGGTGGTGCC GGTCGCCCTG CTGCTGGTCT TCATGCTGCT GTTCATGATG
TTCAACAACG TGCGTGATGG CTTGCTGGTG TTTACCGGTA TTCCTTTTGC GTTGACCGGT
GGCGTGATGG CGCTGTGGTT GCGTGACATA CCGCTTTCGA TCTCCGCCGG GGTGGGCTTT
ATTGCTCTTT CCGGGGTGGC GGTTCTCAAT GGTCTGGTGA TGATTTCCTT CATTCGTAAT
CTGCGCGAGG AGGGAATGGG GTTGCAGCAG GCCGTCACCG AAGGTGCCCT GCAACGTCTG
CGCCCGGTAT TGATGACTGC TCTCGTTGCA TCGCTTGGCT TCGTGCCCAT GGCTCTGGCG
ACTGGGACTG GGGCTGAAGT ACAGCGCCCT CTGGCGACTG TGGTGATCGG TGGGATTCTG
TCCTCTACCG CACTTACGCT GCTGGTGTTG CCAGCGCTCT ATCGTTGGGC CTATCGGCGT
GAGGAGGAGG CTGAGCTGAA AGACTGA
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| Protein sequence | MFERIIQFAI EQRFLVLLAV LAMAGVGVAS YQKLPIDAVP DITNVQVQIS TAAEGFSPLE
TEQRITFPIE TAMAGLPHLK QTRSLSRSGL SQVTVIFEDG TDLYFARQLV NERLQSAKEQ
LPEGVEASMG PISTGLGEIF LWTVEAEEGA LKEDGTPYTP TDLRVIQDWI IKPQLRTVPG
VAEINTIGGF AKEFQVAPDP KRLAAYKLTL GDLLLALERN NANVGAGYIE RNGEQLLIRA
PGQLSTLDDI ANIVVANVDG TPIRVSHVAQ VMLGRELRSG AATENGREVV LGTVFMLIGE
NSRSVSQAVA ARLEEINRSL PEGVVAVTVY DRTNLVDKAI ATVKKNLIEG AILVIVILFL
FLGNIRAALI TAMVIPLSML FTFTGMFSNK VSANLMSLGA LDFGIIVDGA VVIVENAIRR
LAHAQHKLGR ELTRSERLHE VFAASKEARR ALIFGQLIIM VVYLPIFALT GVEGKMFHPM
AFTVVTALFG AMILSVTFVP AAIALFVTGK VKEEENALMR VARRTYEPVL AWVMRRRTLA
FSAAVALVLF SGLLASRMGS EFVPSLSEGD FALQALRVPG TSLTQSVEMQ MRLEETILAK
VPEVERVFAR TGTAEIASDP MPPNISDSYV MLKPRDQWPD PKKSRDALIA ELQAAAELVP
GSNYELSQPI QLRFNELISG VRSDVAVKIF GDDMDVLNST AAEVAETLGG IDGASEVKAE
QTTGLPVLTV AIDRDKAARY GLNVGDIQET VAVAVGGRRA GTLFEGDRRF DLVVRLPENL
RTDIEGLSRL LIPVPATGAA TSVGFIALSE VASLQLAPGP NQVSRENGKR LVVVSANVRG
RDIGSFVQEA EERIRSDVKL PAGYWTTWGG QFEQLQSAAK RLQVVVPVAL LLVFMLLFMM
FNNVRDGLLV FTGIPFALTG GVMALWLRDI PLSISAGVGF IALSGVAVLN GLVMISFIRN
LREEGMGLQQ AVTEGALQRL RPVLMTALVA SLGFVPMALA TGTGAEVQRP LATVVIGGIL
SSTALTLLVL PALYRWAYRR EEEAELKD
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