| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_1167 |
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| Symbol | |
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| ID | 5108669 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 1313987 |
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| End bp | 1314904 |
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| Gene Length | 918 bp |
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| Protein Length | 305 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640502390 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001186665 |
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| Protein GI | 146306200 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.12248 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 0.176296 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGGGCTG CCGTGGCTGA GGTCGAACGG CAGGTGGCCA GAAGCTTCCT GACGACTGCG
CGCTGTGCCA GTTTTAAGCA GGCTGCTCGC AGTCTGAACC TGCCTCCCAT GGTGCTACGC
AGGCAGTTGC AGCGGCTCGA GAAAACTGTT GGAGAGGCGC TCTTCGTGTA TCAGGAGCGC
GCCCTTGCTC TAACGGTACG CGGTCGTTCT TTGCAGGCAG AGCTGGCTGC CCAGTATCAA
GATTTGCGGC CAGAGGCCGC GTTGCTTGAA AAACCCAAGC TTCGTTTGGC GTTACCCGAC
AGGGTGCTCA ACGATATTCT GGGACGGCAT CTGGTGGCCT TTCTGCGTAG GGATGCTGGT
GTGCACCTGG AACTGATCCG CCAGGAACGT GGCCCGTTAA TGCAGAGTGA GGTCATGATC
TGGTTGGCCG ATCCGAATCA GACTCGACCC GACCCAGGTT TCGCCATGAC GCGACCGCAG
CGTCTGGCCT GCATCGACTT TCAGGCGTGC ATAGCCAAGC GCTATGCGCG TGAGCGGCGC
CTCCCCGCCA GCCTCGAAGA TCTGAATGAC TACATGCTGG TTCAGCAGGC CGATATCCCG
ACATCGGCCC TGTTCTCACC GTGGAATGCT CTGGTGGACT CAAGGCGCAG CGCAGTGACG
CGAGTGCATT CTCAGCAGTG GGCGATGGAA CTGGTCAAGC ATGCCGCCTG CGTTGGTCTG
ATGCCGAACT ACATCACTCA TCTCGATGCG AACCTGCAAT CGCTACCCAC CCTCTTCACG
CAGCCCATGA GGCAATCGAT CTGGCTGTCC TGCGCACCAT TGTCCGCGCA GCGCGAGGAC
GTCGTTGGGC TGGTGGCGTT GATCCAGGCT GCGTTCGAGG AGCGGTGGCA GTGGTTTCTG
CCTGATGACG GTCAGTGA
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| Protein sequence | MGAAVAEVER QVARSFLTTA RCASFKQAAR SLNLPPMVLR RQLQRLEKTV GEALFVYQER
ALALTVRGRS LQAELAAQYQ DLRPEAALLE KPKLRLALPD RVLNDILGRH LVAFLRRDAG
VHLELIRQER GPLMQSEVMI WLADPNQTRP DPGFAMTRPQ RLACIDFQAC IAKRYARERR
LPASLEDLND YMLVQQADIP TSALFSPWNA LVDSRRSAVT RVHSQQWAME LVKHAACVGL
MPNYITHLDA NLQSLPTLFT QPMRQSIWLS CAPLSAQRED VVGLVALIQA AFEERWQWFL
PDDGQ
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