| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_1162 |
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| Symbol | |
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| ID | 5106557 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 1308712 |
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| End bp | 1309512 |
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| Gene Length | 801 bp |
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| Protein Length | 266 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640502385 |
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| Product | cation diffusion facilitator family transporter |
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| Protein accession | YP_001186660 |
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| Protein GI | 146306195 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1230] Co/Zn/Cd efflux system component |
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| TIGRFAM ID | [TIGR01297] cation diffusion facilitator family transporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.0355876 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 0.529733 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACAGCT GCTGCGAAAA CAAGGCCGGC GAACTGGCCC AACTGCGCGC TAAACAGAGC
CGATTGCTCT ATATCGTCCT GGCCGTCAAC GCCGTCATGT TCCTGGTGGA GTTCATCGCC
GGTTGGATCG CCAACTCAAC GGCGCTGCTC GGTGACTCGC TGGACATGTT CGGCGACGCG
TCGGTGTATG CCCTTACGCT GTTCGTCCTG CACCGCAGTA TTCGAGCCCG AGCCGGAGCC
GCGCTGTTCA AAGGCGGGTT CATGCTGTTG TTCGGCGTGC TGGTGGTAGC CGATGCTCTG
CGCAAACTGA TACTGCAAGA AGTGCCGTCT GCCGATTTGA TGGGTGTCAT CGGCACACTC
GCACTGATCG CCAATGGCTA CTGCTTCGCG CTGCTCTACA GCCATCGCTC CGATGACCTG
AACATGCGTT CGACCTGGCT CTGCTCGCGT AACGACTTGC TGGCCAACAG CAGCGTGATT
ATCGCAGCAG GCATGGTCGC GCTGACAGGC AGCTTGTGGC CGGACATCCT CGTCGGCCTG
GCCATCGCCG CATTGTTCCT GCACTCCGCC GGGCAGATCA TCCGCGAGGC TTGGATAGAG
TGGCGAGCCA GCGCGCCTGA GCCGCAGCAA TGCCCACAGC CGTTGCTGGG TATCACCGAA
CCGACCGCTA CGCCAGTCCA GTTTGAGCCG GCCAAGAGTT GCTGCGCGGG TGAGGCTCAG
GCGCTGGCTT TAGCGCCAAT GGATACCCTC TTCTGCCCCT GTTTGTGTAA AAGCAACGGT
ATCGACCTTG CTGTGATTTG A
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| Protein sequence | MDSCCENKAG ELAQLRAKQS RLLYIVLAVN AVMFLVEFIA GWIANSTALL GDSLDMFGDA
SVYALTLFVL HRSIRARAGA ALFKGGFMLL FGVLVVADAL RKLILQEVPS ADLMGVIGTL
ALIANGYCFA LLYSHRSDDL NMRSTWLCSR NDLLANSSVI IAAGMVALTG SLWPDILVGL
AIAALFLHSA GQIIREAWIE WRASAPEPQQ CPQPLLGITE PTATPVQFEP AKSCCAGEAQ
ALALAPMDTL FCPCLCKSNG IDLAVI
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