| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_1153 |
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| Symbol | |
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| ID | 5108126 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 1298740 |
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| End bp | 1299885 |
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| Gene Length | 1146 bp |
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| Protein Length | 381 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640502377 |
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| Product | ABC transporter related |
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| Protein accession | YP_001186652 |
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| Protein GI | 146306187 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3839] ABC-type sugar transport systems, ATPase components |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.203038 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 0.427796 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTACCC TCGAACTGCG CAACGTCAAC AAATCCTACG GCAGCGGCCT GGCGGACACC
CTGAAGAACA TCGAACTGGC CATCGACTCC GGCGAGTTCC TGATCCTGGT CGGCCCCTCC
GGCTGCGGCA AATCCACCCT GATGAACTGC ATCGCCGGCC TGGAGGACAT CAGCGGCGGG
GCGATCCTGG TCGACGGCGC CGACATCAGC GGCATGAGCC CCAAGGATCG CGACATCGCC
ATGGTGTTCC AGTCCTATGC GCTGTACCCG ACCATGACGG TGAAGGACAA CATCGCCTTC
GGTTTGAAGA TGCGCAAGCT GCCGCCAGCC GAGATCGAGG CCGAGGTGGC GCGCGTGGCC
AAGCTGCTGC AGATCGAGCA TCTGCTGTCA CGCAAGCCCG GCCAGCTCTC CGGTGGCCAG
CAGCAGCGCG TGGCCATGGG CCGGGCGCTG GCGCGGCGGC CGAAGATCTA CCTGTTCGAC
GAACCTTTGT CGAACCTCGA CGCCAAGCTG CGAGTCGAAA TGCGCACCGA GATCAAGCTG
ATGCACCAGC GTCTGAAGAC CACCACGGTG TACGTCACCC ACGACCAGAT CGAGGCCATG
ACCCTGGGCG ACAAGGTGGC GGTGATGAAG GACGGCATCA TCCAGCAGTT CGGTACCCCG
CAGGAAATCT ACAACGACCC GGCCAATCAG TTCGTCGCCA GCTTCATCGG ATCGCCGCCG
ATGAACTTCA TCCCGCTGCG CACGCAGCTG CGAGATGGTC AGTGCTTCGG CCTGCTCGAC
TCCGGGCAGG CGCGCTGCGA GCTGCACCTG GGCGAGGCGG CCGAACTGGA AGGACGCGAG
CTGATCCTCG GCGTGCGTCC CGAGCAGATC CAGCTGGCCG GCCCCGGTTC GACGCTGCCG
AGCCTGCGTG CCGAGGTCGA GGTGGTCGAG CCGACCGGCC CGGACACCCT GGTGTTCGTC
AGCCTCAACC AGACCAAGGT GTGCTGCCGC CTGGCGCCGG ACGCCGCGCC GCAGGCCGGC
GCCAGCCTGG ACCTGCAGTT CGATCCGGCG CGCGTGCTGC TGTTCGACGC GGCCAGCGGC
GAGCGTCTGC GCCCGGGAAA GCGTCAAGCC ACTGACAACA AGGTGGCGCA GTTGAAAAGA
GGTTGA
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| Protein sequence | MATLELRNVN KSYGSGLADT LKNIELAIDS GEFLILVGPS GCGKSTLMNC IAGLEDISGG
AILVDGADIS GMSPKDRDIA MVFQSYALYP TMTVKDNIAF GLKMRKLPPA EIEAEVARVA
KLLQIEHLLS RKPGQLSGGQ QQRVAMGRAL ARRPKIYLFD EPLSNLDAKL RVEMRTEIKL
MHQRLKTTTV YVTHDQIEAM TLGDKVAVMK DGIIQQFGTP QEIYNDPANQ FVASFIGSPP
MNFIPLRTQL RDGQCFGLLD SGQARCELHL GEAAELEGRE LILGVRPEQI QLAGPGSTLP
SLRAEVEVVE PTGPDTLVFV SLNQTKVCCR LAPDAAPQAG ASLDLQFDPA RVLLFDAASG
ERLRPGKRQA TDNKVAQLKR G
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