Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_1151 |
Symbol | |
ID | 5108124 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | + |
Start bp | 1296950 |
End bp | 1297858 |
Gene Length | 909 bp |
Protein Length | 302 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640502375 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_001186650 |
Protein GI | 146306185 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1175] ABC-type sugar transport systems, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.125531 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 0.687942 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTTCAA ACGCAGTCTT CGCCAAAGCC TCACCGCTGG ATGCCCTGCA GCGCTGGCTG CCCAAGCTGG TGCTGGCGCC GAGCATGGTC ATCGTGCTGG TGGGCTTCTA CGGCTACATC GGCTGGACCT TCCTGCTCTC GTTCACCAAC TCGCGCTTCA TGCCCAGCTA CAACTTCGTT GGGCTGCAGC AGTACGCGCG GCTGTGGGAC AACGACCGCT GGTGGGTGGC GAGCCAGAAC CTGCTGGTGT TCGGCGGTCT GTTCATCGCC ATCAGCCTGG CCATCGGCGT GCTGCTGGCG GTGCTGCTGG ATCAGCGCAT CCGCCGCGAA GGCTTCATTC GCACCATCTT TCTCTACCCC ATGGCGCTGT CGATGATCGT CACCGGCACC GCCTGGAAGT GGCTGCTCAA CCCCGGCCTG GGTCTGGACA AGCTGCTGCG TGACTGGGGC TGGGAAGGCT TTCGCTTCGA CTGGCTGGTG GACCCGGATC GCGTCGTCTA CTGCCTGGTG ATGGCCGCCG TGTGGCAGTC ATCGGGCTTC GTCATGGCGC TGTTTCTCGC CGGACTGCGT AGCGTCGATC AGTCGATCAT CCGCGCCGCC CAGGTCGATG GCGCCAGCCT GCCGAGCATC TACCTGCGCA TCGTGCTGCC GAGCCTGGGC CCGGTGTTCT TCAGCGCGCT GATGATCCTC GCCCATATCG CCATCAAGAG TTTCGACCTG GTCGCCTCGA TGACCGCTGG CGGCCCCGGC TACGCCTCCG ACCTGCCGGC GATGTTCATG TACGCCCACA CCTTTACCCG CGGCCAGATG GGCCTCGGCG CCGCCAGCGC GATGCTGATG CTCGGCGCGG TGCTGGCGAT CCTGGTGCCG TATCTGTATT CCGAACTGCG AGGCAAACGC CATGACTGA
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Protein sequence | MSSNAVFAKA SPLDALQRWL PKLVLAPSMV IVLVGFYGYI GWTFLLSFTN SRFMPSYNFV GLQQYARLWD NDRWWVASQN LLVFGGLFIA ISLAIGVLLA VLLDQRIRRE GFIRTIFLYP MALSMIVTGT AWKWLLNPGL GLDKLLRDWG WEGFRFDWLV DPDRVVYCLV MAAVWQSSGF VMALFLAGLR SVDQSIIRAA QVDGASLPSI YLRIVLPSLG PVFFSALMIL AHIAIKSFDL VASMTAGGPG YASDLPAMFM YAHTFTRGQM GLGAASAMLM LGAVLAILVP YLYSELRGKR HD
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