| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_1150 |
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| Symbol | |
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| ID | 5108123 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 1295525 |
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| End bp | 1296778 |
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| Gene Length | 1254 bp |
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| Protein Length | 417 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640502374 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001186649 |
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| Protein GI | 146306184 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.0392592 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 0.752071 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAGCGA TCTCTCGCCT GTCCACCGCC ATCTCCCTCG CTGTCCTGTT GCCCCTGTCC
GCTACCGCCG GTGAAGTCGA AGTGCTGCAC TGGTGGACGT CCGGTGGTGA AAAACGCGCC
GCCGATACCC TGCAGAAGCT GGTCGAGGCC CAGGGCCACA AATGGAAGGA CTTCGCCGTT
GCCGGTGGCG GTGGCGAAGC GGCCATGACC GTGCTGAAGA CCCGCGCCGT GTCCGGCAAC
CCGCCTGCCG CCGCGCAGAT CAAGGGCCCG GACATCCAGG AGTGGGGCGA GCTGGGCCTG
CTCGCCGATC TCAATGGCGT CGCCGCCGAG CAGAAATGGG ATGACCTGCT GCCACCGCAG
GTGGTCGAGG TGATGAAGTA CCAGGGCGAC TACGTGGCGG TACCGGTCAA CGTGCACCGG
GTCAACTGGC TGTGGATCAA CCCACAAGTG TTCGAGAAGG CGGGTGCCAC GCCGCCGACC
ACCCTCGACG AATTCTTCGC CGCCGCCGAC AAGCTCAAGG CGGCCGGCTT CATCGCCATC
GCCCACGGCG GCCAGCCCTG GCAGGACGGC ACCGTGTTCG AGGACCTGGC CTTCAGCATT
CTCGGCGCCG AGGGCTTTCG CAAGGCCTTC GTCGAGCAGG ACCGCGCCAC CCTGACCGGC
GACAAGATGG TCGAGGTGTT CGCCGCCCTG CAGAAGCTGC GCGGCTACAT CGACGCCGAC
GCCGCCGGGC GCGACTGGAA CAGCGCCACC GGCATGGTGA TCGACGGCAA GGCCGGCATG
CAGATCATGG GCGACTGGGC CAAGAGCGAG TGGACCGCCG CCGGCAAGGT CGCCGGCAAG
GACTACGAAT GCCTGGCCTT CCCCGGCACC CAGGGCAGCT TCGCCTTCAA CATCGACTCG
CTGGCCATGT TCAAGCTGAG CAACGCCGAG AACCGCAAGG CCCAGGAAGA CCTGGCGCGC
ACGGTGATGG GCAACGAGTT CCAGGAGTTC TTCAACCAGA ACAAGGGTTC GATCCCGGTG
CGCATGGACC AGGACATGAG CAGCTTCGAC GCCTGCGCGC AGAAGTCCAT GGCCGACTTC
AAGGACGCCG CCGCCGGTGG CGGTCTGCAG CCGAGCCTGG CCCACGGCAT GGCCGCTTCC
AGCTACGTGC AGGGCGCGGT GTTCGACGTG GTGACCAACT TCTTCAACGA CCCCAAGGCC
GACCCCAAGC GCGCCGCCCA GCAGTTGGCG GCGGCGATTC AGGCGGTGCA GTGA
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| Protein sequence | MKAISRLSTA ISLAVLLPLS ATAGEVEVLH WWTSGGEKRA ADTLQKLVEA QGHKWKDFAV
AGGGGEAAMT VLKTRAVSGN PPAAAQIKGP DIQEWGELGL LADLNGVAAE QKWDDLLPPQ
VVEVMKYQGD YVAVPVNVHR VNWLWINPQV FEKAGATPPT TLDEFFAAAD KLKAAGFIAI
AHGGQPWQDG TVFEDLAFSI LGAEGFRKAF VEQDRATLTG DKMVEVFAAL QKLRGYIDAD
AAGRDWNSAT GMVIDGKAGM QIMGDWAKSE WTAAGKVAGK DYECLAFPGT QGSFAFNIDS
LAMFKLSNAE NRKAQEDLAR TVMGNEFQEF FNQNKGSIPV RMDQDMSSFD ACAQKSMADF
KDAAAGGGLQ PSLAHGMAAS SYVQGAVFDV VTNFFNDPKA DPKRAAQQLA AAIQAVQ
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