| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_1149 |
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| Symbol | |
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| ID | 5108122 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 1293883 |
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| End bp | 1295322 |
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| Gene Length | 1440 bp |
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| Protein Length | 479 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640502373 |
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| Product | integral membrane sensor signal transduction histidine kinase |
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| Protein accession | YP_001186648 |
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| Protein GI | 146306183 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.000106108 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 0.933142 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTAAGC GCCGCTCGCT GGTGCCGCGC TCGCTGCTCG GGCGCATGCT GCTGCTGACC
CTGCTGGCGG TGCTGCTGGC GCAGGTGCTG TCCAGCCTGA TCTGGTTGTC GCAGCTGCGC
GCCAGCCAGA TGGAGGGGCT GGTCAGTACC GCTCGCAGCC TGGCGCAGTC GATGGTGGCC
AGCGTCAGTT ACTTTCGCTC GCTGCCGGTG GGCTACCGCC CGCTGGTGCT CGACCAGCTG
CGCAGCATGG GCGGCACGCG CTTCTTCGTT TCGCTCAACG ACAAGCCGCT TCAGATGCCG
GTGCTCGCCG AGACGCCGCG CAAGCGCGCG GTCATCAGCG AGGTCGACGC CGTGCTGCGC
GAGCGCCTCG GCAGCCAGCT GGAGCTGTCG GTGCACTTCG TCAGCCCGGA CCATCTGCGA
GTATTCAACA GTGGCCTGCT GCTCAACGAG CTGCCGCGTT CCTGGGCCTA TTACGCGCTG
AGCCTGGAGC CGCTCAACCC GCCGATCCTG GTCACCCAGA TCCGCATCGG CGAAGGCGAG
TGGCTGTATC TGGCCTCGCT GCTGCCCGAG CCCTACGTCA ACCTCGAGGA CCAGGGCCTG
CCGCACCAGC AGCTGTGGTT CATCCTGCTG ACCAGCGGGT TTCTGCTGCT GTTCGTCGGC
CTGCTGGTGC ACTGGCAGAG CCAGCCGCTC AAACGCCTGG CGCTGGCGGC GCGGGAAATG
TCGCTGGGCG CCGATGTCGA GCCGCTGGCC GAGGTGGGCG GCAGCGAGGT GGTGGAGGTG
CGCCGCGCCT TCAACAGCAT GCGCGAGCGC ATCAGCCGCT ACCTCAGCGA ACGCAGTCAG
CTGTTCAGCG CGATTTCCCA CGATCTGCGC ACGCCCATCA CCCGCCTGCG TCTGCGCGTC
GAACTGCTCG ACGACGAGGC GCTGCAGGCC AAGTTCAGCC GCGATCTCGA CGAGCTGGAG
GTGCTGGTCA AGGGCGCCCT GCAGTGCGTC AAGGACACCG ACATCCACGA GAACATCGAG
CCGGTCGACC TCAATCACCT GCTGCACGGG CTGATCGAAC CCTACCTCGG CACGGGCCGG
GTCACCGTCG ATGGCGCCGC CCGCTACCCT TATCCCGGCA AGCCGCTGGC CCTGCGCCGC
TGCATCGGCA ACCTGCTGGA CAACGCGCTG AAGTATGGCG AGCGTGCGCA CCTGCACATC
GAGGACGACG CCGAGGCGTT CGTCCTGCAC GTCGATGACG AGGGGCCGGG TGTGCCCGAA
CAGAAGCTCG AACAGGTGTT CGAGCCGCAT TTTCGCCTGG CCAGCCAGCA GCAGGGCTAC
GGCATGGGCC TGGGCATCGC GCGCAACCTG GCGCACAGCC ACGGCGGCGA GCTGAGCCTG
CGCAATCTGC GTGAAGGCGG GTTGCGCGTC ACCCTCTGGC TGCCGCGCCA GACCAGTTGA
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| Protein sequence | MAKRRSLVPR SLLGRMLLLT LLAVLLAQVL SSLIWLSQLR ASQMEGLVST ARSLAQSMVA
SVSYFRSLPV GYRPLVLDQL RSMGGTRFFV SLNDKPLQMP VLAETPRKRA VISEVDAVLR
ERLGSQLELS VHFVSPDHLR VFNSGLLLNE LPRSWAYYAL SLEPLNPPIL VTQIRIGEGE
WLYLASLLPE PYVNLEDQGL PHQQLWFILL TSGFLLLFVG LLVHWQSQPL KRLALAAREM
SLGADVEPLA EVGGSEVVEV RRAFNSMRER ISRYLSERSQ LFSAISHDLR TPITRLRLRV
ELLDDEALQA KFSRDLDELE VLVKGALQCV KDTDIHENIE PVDLNHLLHG LIEPYLGTGR
VTVDGAARYP YPGKPLALRR CIGNLLDNAL KYGERAHLHI EDDAEAFVLH VDDEGPGVPE
QKLEQVFEPH FRLASQQQGY GMGLGIARNL AHSHGGELSL RNLREGGLRV TLWLPRQTS
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