| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_1146 |
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| Symbol | |
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| ID | 5108119 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 1289550 |
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| End bp | 1291748 |
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| Gene Length | 2199 bp |
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| Protein Length | 732 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640502370 |
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| Product | hypothetical protein |
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| Protein accession | YP_001186645 |
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| Protein GI | 146306180 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1944] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR00702] uncharacterized domain
[TIGR03549] conserved hypothetical protein TIGR03549 |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.202327 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 0.214349 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAATCA AGGTCAACTT TCTCGACAAC CTCCGACTCG AAGCCAAGTT CGATGACTTC
ACAGTGGTGG CCGACCAGCC GATTCGCTAC AAGGGCGACG GTTCGGCGCC GGGACCGTTC
GACTATTTCC TGGCCTCCTC GGCGCTGTGC GCGGCGTACT TCGTCAAGCT GTACTGCCAG
ACGCGCGACA TTCCCACCGA GAATATCCGC CTGTCGCAGA ACAACATCGT CGACCCGGAG
AACCGCTACG CGCAGATCTT CAAGATCCAG GTCGAACTGC CGGCGGACAT TTCCGAGAAG
GACCGTCAGG GCATCCTGCG CTCCATCGAC CGCTGCACGG TGAAGAAGGT GGTGCAGCAG
GGCCCCGAGT TCATCATCGA GGAAGTCGAC AACCTCGACG CCGATGCCCA GGCGCTGCTG
ATGCCGGTGA GTGACACCAC CACCTACATC CCGGGCAAGG ACCTGCCGCT GGAGCAGACC
ATCGCCAACA TGTCGGGCAT CCTCGCCGAG CTGGGGATGA AGATCGAGAT CGCCTCCTGG
CGCAACATCG TGCCCAACGT CTGGTCGCTG CATATCCGCG ACGCGCAGTC GAACCTGTGC
TTCACCAACG GCAAGGGCGC GACAAAGGAG GCCGCGCTGG CTTCGGCCCT CGGCGAGTTC
ATCGAGCGGC TGAACTGCAA CTTCTTCTAC AACGACCAGT TCTGGGGCGA GGACATCGCG
GGCGCCGAGT TCGTCCACTA CCCCAACGAG CGCTGGTTCA AGCCGGGGCC GAAGGATGCG
CTGCCCGAGG AAATCCTCGA CGAGCACTGC CGGACCATCT TCGATCCGGA CGGCGAGCTG
CGCGCCTCGC ACCTGTTCGA CACCAACTCG GGCAACACCG CGCGCGGCAT CTGCTCGCTG
CCGTTCGTGC GCCAGAGCGA TGGCCAGACG GTGTACTTCC CCAGCAACCT GATCGAGAAC
CTGTACCTGT CCAACGGCAT GAGCGCCGGC AACACCCTGG CCGAGGCGCA GGTGCAGTGC
CTGTCGGAGA TCTTCGAGCG AGCGGTCAAA CGCGAGATTC TGGAGAACGA GCTGTGCCTG
CCGGACGTGC CGCAGGACGT GCTGGCCAAG TACCCGGGCA TCCTCGCCGG CATCCAGGGT
CTGGAGGAAC AGGGCTTCCC GGTGCTGGTG AAGGATGCCT CGCTCGGCGG CGAATTCCCG
GTGATGTGCG TGACCCTGAT GAACCCGCGT ACCGGCGGCG TGTTCGCCTC CTTCGGCGCC
CACCCGAGCC TGGAAGTGGC GCTGGAGCGC AGCCTTACCG AACTGCTCCA GGGCCGCAGC
TTCGAGGGCC TCAACGATCT GCCGCAGCCC ACCTTCGACA GCCTGGCGCT GACCGAACCG
AACAACTTCG TCGAGCACTT CATCGACTCC AGCGGCGTGG TGTCCTGGCG CTTCTTCAGT
GCCAGGGCCG ACTTCGAATT CGTCGAGTGG GACTTCTCCG GCGAAGGGGC AGACTCCAAC
GAGCAGGAGG CCGCGACCCT GTTCGGCATC CTCGAGAACA TGGGCAAGGA AGTCTACGTG
GCCACCTATG ACGACCTCGG CGCCAACGCC TGCCGCATCC TGGTGCCGGG CTACTCGGAG
ATCTACCCGG TCGAGGACCT GATCTGGGAC AACACCAACA AGGCGCTGCT GTTTCGCAAG
GACATCCTCA ACCTGCACGC CCTGAGCGAC CGCGAACTCA AGTCGCTGCT GCGCAACCTG
AACAACACCG AGGTCGACGA CTACACCGAC ATCACCACGC TGATCGGCAT CGAGTTCGAC
GACAACACGG TGTGGGGCCA GCTGACCATT CTCGAGCTGA AGCTCTTGAT CAACCTGGCG
CTGAAGAAAT ACGACGACGC CAAGGAGCTG GTCGAGGCCT TCCTGCAGTA CAACGACAAC
ACCGTCGAGC GCGGCCTGTT CTACCAGGCG GTCAACGCCG TGCTGGAGAT CCAGTTGAAC
GACGAGCTGG AGCTGGCCGA CTACGAGCAC AACCTGCGGC GCATGTTCGG CAACGAGCGC
ATGGACGCGG TGATCGGCTC GGTGGAGGGC AGCGTGCGCT TCCATGGCCT GACCCCGACC
AGCATGCAGC TCGAAGGCCT GGACAAGCAC CTGCGCCTGA TCGACAGCTA CAAGAAACTG
CACGCCGCCC GCGCCAGGGC GGCGGGTCTG GCCGGCTGA
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| Protein sequence | MEIKVNFLDN LRLEAKFDDF TVVADQPIRY KGDGSAPGPF DYFLASSALC AAYFVKLYCQ
TRDIPTENIR LSQNNIVDPE NRYAQIFKIQ VELPADISEK DRQGILRSID RCTVKKVVQQ
GPEFIIEEVD NLDADAQALL MPVSDTTTYI PGKDLPLEQT IANMSGILAE LGMKIEIASW
RNIVPNVWSL HIRDAQSNLC FTNGKGATKE AALASALGEF IERLNCNFFY NDQFWGEDIA
GAEFVHYPNE RWFKPGPKDA LPEEILDEHC RTIFDPDGEL RASHLFDTNS GNTARGICSL
PFVRQSDGQT VYFPSNLIEN LYLSNGMSAG NTLAEAQVQC LSEIFERAVK REILENELCL
PDVPQDVLAK YPGILAGIQG LEEQGFPVLV KDASLGGEFP VMCVTLMNPR TGGVFASFGA
HPSLEVALER SLTELLQGRS FEGLNDLPQP TFDSLALTEP NNFVEHFIDS SGVVSWRFFS
ARADFEFVEW DFSGEGADSN EQEAATLFGI LENMGKEVYV ATYDDLGANA CRILVPGYSE
IYPVEDLIWD NTNKALLFRK DILNLHALSD RELKSLLRNL NNTEVDDYTD ITTLIGIEFD
DNTVWGQLTI LELKLLINLA LKKYDDAKEL VEAFLQYNDN TVERGLFYQA VNAVLEIQLN
DELELADYEH NLRRMFGNER MDAVIGSVEG SVRFHGLTPT SMQLEGLDKH LRLIDSYKKL
HAARARAAGL AG
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