| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_1141 |
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| Symbol | |
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| ID | 5108114 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 1285548 |
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| End bp | 1286441 |
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| Gene Length | 894 bp |
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| Protein Length | 297 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640502365 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001186640 |
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| Protein GI | 146306175 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 0.387698 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGTCA AGCAACTACG CGCCTTTCTC GCCGTGGCGC AAAGCCTGAG CTTCGCCCAG
GCCTGCGAGC GCCTGCATCT GTCGCAGCCG GCACTGAGCC TGGCGATCAA GAACCTGGAG
CAATCGCTCG GCGGTCAGTT GCTGGTGCGC ACCACCCGCA GCGTGGCGCT GACGCCGGAG
GGCGAGACGC TGTTGCCGAT CGCCGTGCGT CTGCTCGCCG ACTGGGACAA CGCCGAGGAC
CTGCTGCGCC AGCACTTCAC CCTGCAGATG GGCAAGGTGG CGGTGGCGGC CATGCCGTCG
TTCGCCGGCA ACCGACTGCC GGCGGCGTTG CGTGCTTTTC GCGACGCCTA CCCGCGGGTC
AACGTGGCGG TGCACGACGT GATCAACGAA CAGGTGATGG AAATGGTGCG CGACGGCCGC
GTCGAGCTGG GCATCGCCTT CGAGCCGGCA ACCCTCGATG GTCTGCAGTT CACCCCGCTG
TACGAGGATC GTTTCGTCGC CGTGGTGCCG GCCGACAGCG AGCTGGCCGG GCGCGAGGCC
CTGAGCTGGG TGGATCTGCT CGACCGCCCC TTCATCACCC TGCAGCGGCC CTCGGCAGTG
CGCCTGCTGC TGGAAGACAG CGTGATCGCC AGCCACGGCA GGCTGCCGGT GGCGTTCGAG
AGTCATCAGC TGGTCACGGT CGGGCGCATG GTCGCCGAAG GCCTCGGCGT CAGTGCGGTG
CCGCAGCTGT GTCGGCAGCA GATGGAGGAG TTGGGTGCGC GCTGTCTGCC GCTGGGCGAG
CCGCAGGTTA CGCGGCGTGT CGGTCTGCTG CACCAGGCCG GGCGCCAGCT GTCCAGCGCG
GCGCAGGCGT TGAGCGACAC GCTGTTACGT CAGGCAGAGC GTTATCAGGC GTAG
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| Protein sequence | MTVKQLRAFL AVAQSLSFAQ ACERLHLSQP ALSLAIKNLE QSLGGQLLVR TTRSVALTPE
GETLLPIAVR LLADWDNAED LLRQHFTLQM GKVAVAAMPS FAGNRLPAAL RAFRDAYPRV
NVAVHDVINE QVMEMVRDGR VELGIAFEPA TLDGLQFTPL YEDRFVAVVP ADSELAGREA
LSWVDLLDRP FITLQRPSAV RLLLEDSVIA SHGRLPVAFE SHQLVTVGRM VAEGLGVSAV
PQLCRQQMEE LGARCLPLGE PQVTRRVGLL HQAGRQLSSA AQALSDTLLR QAERYQA
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