| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_1139 |
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| Symbol | |
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| ID | 5108112 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 1284078 |
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| End bp | 1284734 |
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| Gene Length | 657 bp |
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| Protein Length | 218 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640502363 |
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| Product | butyryl-CoA:acetate CoA transferase |
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| Protein accession | YP_001186638 |
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| Protein GI | 146306173 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG2057] Acyl CoA:acetate/3-ketoacid CoA transferase, beta subunit |
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| TIGRFAM ID | [TIGR02428] 3-oxoacid CoA-transferase, B subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 0.477496 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCACTGA CCCGTGAACA AATGGCCCAG CGCGTGGCCC GCGAGCTGCA GGACGGCTTC
TACGTCAACC TCGGCATTGG CATCCCTACC CTGGTCGCCA ACTACGTACC CGAAGGCATG
CAGGTGATGC TGCAGTCGGA GAATGGCCTG CTCGGCATGG GCGCCTTCCC CACCGAGGAA
GAAGTGGACG CCGACATGAT CAACGCCGGC AAGCAGACCG TCACCGCGAT CAAGGGCGCA
GCGATCTTCG ACTCGTCGCA GTCCTTCGCC ATGATCCGTG GCGGCCATGT CGACCTGACC
GTGCTCGGCG CCTTCGAGGT GGACGTGCGC GGCAACATCG CTTCCTGGAT GATCCCCGGC
AAGCTGGTCA AGGGCATGGG CGGCGCCATG GACCTGGTGG CCGGTGCCGA CAACATCATC
GTCACCATGA CCCACGCCTC CAAGGACGGC GAGTCCAAGC TGCTGGAACA TTGCAGCCTG
CCGCTGACCG GCTGTGGCTG CATCCGCAAG GTGCTGACCG ACCTGGCCTA TCTGGAGATC
GAGAACAACG CCTTCATCCT GCGCGAACGG GCGCCGGGTG TGAGCGTCGA GGAAATCGTG
GCCAAGACCG CCGGCAAGCT GATCGTCCCC GAACACGTAC CGGAAATGAG CTTCTAA
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| Protein sequence | MALTREQMAQ RVARELQDGF YVNLGIGIPT LVANYVPEGM QVMLQSENGL LGMGAFPTEE
EVDADMINAG KQTVTAIKGA AIFDSSQSFA MIRGGHVDLT VLGAFEVDVR GNIASWMIPG
KLVKGMGGAM DLVAGADNII VTMTHASKDG ESKLLEHCSL PLTGCGCIRK VLTDLAYLEI
ENNAFILRER APGVSVEEIV AKTAGKLIVP EHVPEMSF
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