| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_1137 |
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| Symbol | |
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| ID | 5108110 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 1281218 |
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| End bp | 1282606 |
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| Gene Length | 1389 bp |
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| Protein Length | 462 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640502361 |
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| Product | short chain fatty acid transporter |
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| Protein accession | YP_001186636 |
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| Protein GI | 146306171 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG2031] Short chain fatty acids transporter |
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| TIGRFAM ID | [TIGR00366] conserved hypothetical integral membrane protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 0.534367 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTGGTC AAAGCCCTTA CAACCATAAA AAAGAGGCAT CCCCCATGTT CAACACACTC
ACCCGCATGA GCGTGGGCCT GGTACAGAAG TACCTGCCCT CGCCCTTCGT CTTTTCCACC
CTGCTCACCC TGGGCGTGCT GATCGCCGGC ATGACCGCCA CCGGGCAGTC GCTGCCGGCC
ATGGTCCAGC ACTGGAGCGG CGGCTTCTGG ACACTGCTCG GCTTCGCCAT GCAGATGGCG
CTGATCTTCG TCACCGGCCA CGCCCTGGCC AGCGCGCCGA TCATCAACCG CCAGCTCGAC
CGCCTGGCCG CGATCGCGCG CACGCCGGGC CAGGCGATCA TCATGGTCAC CCTGGTGGCA
CTGGTGGGCT GCTGGGTCAA CTGGGGCTTC GGCCTGGTGA TCGGCGCAGT GTTCGCCCGA
GCCCTGGCGC GCAAGGTCGC AGGCGTTGAC TACCCGTTGC TGGTGGCCTC GGCCTACTCG
GGCTTTCTGG TCTGGCACGG CGGCCTCGCC GGTTCGGTGC CGCTGTCCAT GGCCACCGGC
GGCCCCGATC TGGCACGTAT CACCGCCGGT GTACTGACCG AACCGGTGAG CATCACCCAG
ACGCTGTTCA GCCCGCTGAA CCTGACCATC GTCGCGCTTC TGGTAATCGG CCTGCCGCTG
CTCAACCGCG CCATGCATCC GCGTCAGGGT GCCAAGGTGG CCGACCCGGC CAAGCTGGTG
GAATCGCACG CCGAGCTGCC GGCCCGTGAC ACCCCGGCGC AGCGCCTGGA CGACAGCCGC
ATCCTCGGCC TGGCGCTGGT GGCCATGGCC GGCATCTATC TGTTCAACCA CTTCGCCAGC
AAGGGCTTCG TGCTCGGCCT GGACGTGGTC ATCGCCATCT TCCTGTTCAG CGGCCTGCTG
ATGCACGGCA CCCCGGAGCG CTACATGCGC GCGGTGGACG AGAGCGTGCG CGGTATCGGC
GGTATCGTCC TGCTGTTTCC CTTCTATGCC GGGATCATGG GCATGATGAT GGGCGCCAAC
GCCGACGGCG TCTCCCTCGG TCGGCAGATC ACCGAGTCCT TCATTTCCTG GTCCTCGGCC
GACACCTTCC CGCTGCTGGC CTTCCTCAGC GCCGGTGTGG TCAACGTGTT CGTGCCCTCC
GGTGGCGGCC AGTGGGCCGT ACAGGGCCCG ATCATGCTGC CGGCTGCCCA GGCTCTGGGC
GTATCGCCCA CCGTCACCGC CATGGCGATT GCCTGGGGCG ACGCCTGGAC CAACATGATC
CAGCCGTTCT GGGCGCTGCC GCTGCTGGGC ATCGTCGGCC TCGGCGCGCG CGACATCATG
GGCTACTGCC TGATCATGCT GCTGTACTCG GGCGTGGTGA TCTGCGGCGC GTTCTATCTG
CTCGGCTGA
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| Protein sequence | MPGQSPYNHK KEASPMFNTL TRMSVGLVQK YLPSPFVFST LLTLGVLIAG MTATGQSLPA
MVQHWSGGFW TLLGFAMQMA LIFVTGHALA SAPIINRQLD RLAAIARTPG QAIIMVTLVA
LVGCWVNWGF GLVIGAVFAR ALARKVAGVD YPLLVASAYS GFLVWHGGLA GSVPLSMATG
GPDLARITAG VLTEPVSITQ TLFSPLNLTI VALLVIGLPL LNRAMHPRQG AKVADPAKLV
ESHAELPARD TPAQRLDDSR ILGLALVAMA GIYLFNHFAS KGFVLGLDVV IAIFLFSGLL
MHGTPERYMR AVDESVRGIG GIVLLFPFYA GIMGMMMGAN ADGVSLGRQI TESFISWSSA
DTFPLLAFLS AGVVNVFVPS GGGQWAVQGP IMLPAAQALG VSPTVTAMAI AWGDAWTNMI
QPFWALPLLG IVGLGARDIM GYCLIMLLYS GVVICGAFYL LG
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