| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_1123 |
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| Symbol | |
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| ID | 5108096 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 1261074 |
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| End bp | 1263788 |
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| Gene Length | 2715 bp |
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| Protein Length | 904 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 640502347 |
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| Product | ATPase, P-type (transporting), HAD superfamily, subfamily IC |
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| Protein accession | YP_001186622 |
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| Protein GI | 146306157 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0474] Cation transport ATPase |
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| TIGRFAM ID | [TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC
[TIGR01517] plasma-membrane calcium-translocating P-type ATPase
[TIGR01523] potassium and/or sodium efflux P-type ATPase, fungal-type |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 0.91137 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACACTC GGCTCCCTGA AAACTCTGAC AGCGCCTGGC ACCAACTGAC TCCGCAACAA
GCGTTGGACG CCCAACAGAG CAGCCAGACC GGTCTCAGCG ACGCAGAGGC CAGCGCCCGC
CTGCAGCGCC ATGGCCCCAA TCGCCTGCCG CCGCCCAAGC GACGCGGCCC TTTGTTGCGT
TTGCTGTATC AGTTCCACAA CGTGCTGCTG TACATGATGA TGGCCGCCGC CCTGGTCACC
GCCCTGCTCG GCCACTGGGT CGATACCGGG GTGATCCTCG CCGCCGTGCT GATCAACGTG
GTGATCGGCT TCATCCAGGA AGGCAAGGCG GAGAATGCCC TCGACGCCAT CCGCAGTCTG
CTGTCGCCGC ACGCCCTGGT GCTGCGCGGC GGCGAACGCC GCGAGATCGA CGCCGAACAG
CTGGTGCCCG GCGACATCGT CCTGCTCGCC TCCGGCGACA AGGTGCCGGC CGACCTGCGC
CTGATCAGCG TGAAGAACCT GCTGGTGGAA GAAGCGGCGC TGACCGGCGA ATCGCTGCCG
GTGGAAAAGT CCCTGGCCCA TTGCCAGGCG GATGCGGCGC TGGGCGACCG GCGCTGCATG
GCCTATTCCG GCACCCTGGT GGCCAGCGGT CAGGCCAGCG GGGTGGTGGT GGCTACCGGT
GCGGGTACCG AGCTGGGCCG CATCGGCGCC ATGCTGCAGC AGGTGCAGGC AATGACCACG
CCGCTGCTGC GGCAGATCGA GCAGTTCAGC CGCTGGCTGG CGCTGGCCAT TCTGATCTTC
GCCATGGCCA CCTTCGCCCT CGGCACCTTC TGGCACGGCC AGGACCCGGC CGAGATGTTC
ATGATGGTGG TGGCGCTGAC TGCCGCCGCC ATCCCCGAAG GCCTGCCGGC ACTGATGACG
GTGATCCTCG CCCTCGGCGT GCAGCGCATG GCCGGGCGCA ACGCCATCGT GCGGCGTCTG
CCGGCGGTGG AAACCCTCGG CTCGGTAACG GTGATCTGCT CGGACAAGAC CGGCACCCTG
ACGCGCAACG AAATGACCGT GCAACGCCTG GTCAGCGCCA GCCGGGTGCT CGACGTCAGC
GGCGTCGGCT ATGCCCCGGA GGGCGCCTTC CATCTCGACG GCGCGCTGGT CGAGCCGGAT
GCCGCGCTGC TGGAAATCGC CCGCGCCGCC ACCCTGTGCA ACGACGCCCA GCTGCAGCAG
GACGCCGCCG GAACCTGGCG CCTGCAGGGC GACCCCACCG AGGGCGCGCT GCACACCCTG
GCGTTGAAGG CCGGGCTGGA TACCCCGACG CTGAACCTGC AGTTGCCGCG TAGCGACACC
ATCCCCTTCG AGTCCGAGCA CCGCTTCATG GCCAGCCTGC ACCATGACCA CCAGGGGCAT
GGCGTGATCT ACCTCAAGGG CGCGCCTGAG CGCCTGCTGG AGATGTGCAG CGGCCAGCGC
GATGCCGGCG GCGGCGTGCA ACCGCTGGAC GCCGACTACT GGCGGCGCCA GGCCACCGAT
CTGGCGGCCC GCGGCCTGCG CCTGCTGGCC ATCGCCAGCC GCACGGTGAG CGCCGAGCAG
CGCAGCCTGA GCTTCGCCGA GGTGGAACAG GACATGTGCC TGCTGGCCCT GGTCGGCATC
ATCGACCCAC CGCGCGAGGA AGCCATCGCC GCCGTCGCCG AATGCCAGCG CGCCGGCATC
CGGGTGAAGA TGATCACCGG CGACCACGCC GAAACCGCCC GCGCCATCGG CGCCCAGCTG
GGTATCGGCA TCGGCCTGCC GGCGCTGACC GGCGCGGAGC TGGAACTGCT CGACGAGCGC
CGTCTGCGCG AGGTGCTGCC CGGCGTCGAG GTATTCGCCC GCGCCAGCCC CGAGCACAAG
CTGCGCCTGG TGCAGGCCAT GCAGGCCAGC GGCGAGGTGG TGGCGATGAC CGGCGACGGC
GTCAACGACG CACCGGCCCT CAAGCGCGCC GACGTTGGCG TGGCCATGGG CGACAAGGGC
ACCGAGGCGG CCAAGGAGGC AGCCGAAGTG GTGCTGGCCG ACGACAACTT CGCCACCATC
GCCGGCGCCG TGCGCGAGGG CCGGGCGATC TACGACAACC TGAAGAAGTT CATCCTCTTC
GCCCTGCCCA CCAACGGCGG CCAGGCGCTG ATCGTGATCG CCGCCATCCT GTTCCAGCTG
ACCCTGCCGC TGACCCCGGC GCAGGTGCTG TGGATCAACA TGGTCACCTC GGTGACCCTG
GGCCTGGCGC TGGCCTTCGA ACCGGCCGAG GCCGGGCTGA TGGACCGTCC GCCGCGGGCG
CCGGACGAGC CCTTGCTGTC GGGCTTGTTC GTCTGGCGCG TGCTGCTGGT GTCGCTGCTG
ATGGCCGGTG CCGGCATCGG CCTGTTCCTC TGGGAACTGC AGCAGGGCAC CGGGCTGGAC
AGCGCAAGGA CCATGGCGCT GAACGCGGTG GTGATGTGCG AGGTGTTCTA CCTGATCAAC
AGCCGGCGCA TCTTCGCCTC GGTGCTCAGC CTCGACGGCC TGCTGGGCAG CCGCGCGGTG
CTGCTGGCGA TCGCCGCCTG TCTGCTGCTG CAGGCGCTGT ACACCTACGC GCCGCCGATG
CAGCGGCTGT TCAATTCCAC CGCGCTGGAT GCGGCGCAGT GGGCGCGCGT GGTGCTGGCC
GGGCTGGCGG TGTTCTGCAT CGCCGAGCTG GAGAAATGGG TGATTCGTCG TTGGCACCTG
CAGCCGAGCG GGTGA
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| Protein sequence | MDTRLPENSD SAWHQLTPQQ ALDAQQSSQT GLSDAEASAR LQRHGPNRLP PPKRRGPLLR
LLYQFHNVLL YMMMAAALVT ALLGHWVDTG VILAAVLINV VIGFIQEGKA ENALDAIRSL
LSPHALVLRG GERREIDAEQ LVPGDIVLLA SGDKVPADLR LISVKNLLVE EAALTGESLP
VEKSLAHCQA DAALGDRRCM AYSGTLVASG QASGVVVATG AGTELGRIGA MLQQVQAMTT
PLLRQIEQFS RWLALAILIF AMATFALGTF WHGQDPAEMF MMVVALTAAA IPEGLPALMT
VILALGVQRM AGRNAIVRRL PAVETLGSVT VICSDKTGTL TRNEMTVQRL VSASRVLDVS
GVGYAPEGAF HLDGALVEPD AALLEIARAA TLCNDAQLQQ DAAGTWRLQG DPTEGALHTL
ALKAGLDTPT LNLQLPRSDT IPFESEHRFM ASLHHDHQGH GVIYLKGAPE RLLEMCSGQR
DAGGGVQPLD ADYWRRQATD LAARGLRLLA IASRTVSAEQ RSLSFAEVEQ DMCLLALVGI
IDPPREEAIA AVAECQRAGI RVKMITGDHA ETARAIGAQL GIGIGLPALT GAELELLDER
RLREVLPGVE VFARASPEHK LRLVQAMQAS GEVVAMTGDG VNDAPALKRA DVGVAMGDKG
TEAAKEAAEV VLADDNFATI AGAVREGRAI YDNLKKFILF ALPTNGGQAL IVIAAILFQL
TLPLTPAQVL WINMVTSVTL GLALAFEPAE AGLMDRPPRA PDEPLLSGLF VWRVLLVSLL
MAGAGIGLFL WELQQGTGLD SARTMALNAV VMCEVFYLIN SRRIFASVLS LDGLLGSRAV
LLAIAACLLL QALYTYAPPM QRLFNSTALD AAQWARVVLA GLAVFCIAEL EKWVIRRWHL
QPSG
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