Gene Pmen_1121 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_1121 
Symbol 
ID5108094 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp1260023 
End bp1260343 
Gene Length321 bp 
Protein Length106 aa 
Translation table11 
GC content64% 
IMG OID640502345 
ProductArsR family transcriptional regulator 
Protein accessionYP_001186620 
Protein GI146306155 
COG category[K] Transcription 
COG ID[COG0640] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value0.534807 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGATAC ACACCGACAC AGCCATGGAC ATCGACGCCA TCATCAAGGC CCTCGCCCAC 
CCAGTGCGCC GCGACATCCT CGACTGGCTC AAGGAGCCCG AGCGCCACTT CGCCGAGCAG
GATCATCCGC TGGAGATCGG CGTGTGCGCC GGCAAGATCT TCCTGCGCAC CGGGCTGTCG
CAATCCACGG TTTCCGCCCA TCTGACCACC CTGCAGCGCG CCGGTCTGGT GACCAGCCGC
AAGGTCGGCC AGTGGCACTT CTTCAAGCGC AACGAGGAGC TGATCCAGGC CTTCGTCGCG
CATCTCGGCC AGCAACTCTG A
 
Protein sequence
MTIHTDTAMD IDAIIKALAH PVRRDILDWL KEPERHFAEQ DHPLEIGVCA GKIFLRTGLS 
QSTVSAHLTT LQRAGLVTSR KVGQWHFFKR NEELIQAFVA HLGQQL