Gene Pmen_1112 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmen_1112 
Symbol 
ID5108085 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas mendocina ymp 
KingdomBacteria 
Replicon accessionNC_009439 
Strand
Start bp1252298 
End bp1252525 
Gene Length228 bp 
Protein Length75 aa 
Translation table11 
GC content64% 
IMG OID640502336 
Producthypothetical protein 
Protein accessionYP_001186611 
Protein GI146306146 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value0.238884 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACCTA TCGCCTACCT CCTGGCGCTC GCCTGCGCGA CTACCCTGGC GCACGCCGAA 
ACGCCCGAGC ACTACCACTA CGGCATGCAC CTGGACATCG CCAAGGTCAT CAGCCAGACC
CTGCCGCAAG GCTGCGAAGC AGGCGAAGCC CGCATGGTCT ACCTGGACTC CAAGGGCGAG
CAGCACACGC TGATCTACCA GCGCATCGGC GAAGACTGCC GCTACTGA
 
Protein sequence
MKPIAYLLAL ACATTLAHAE TPEHYHYGMH LDIAKVISQT LPQGCEAGEA RMVYLDSKGE 
QHTLIYQRIG EDCRY