Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pmen_1108 |
Symbol | |
ID | 5108081 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas mendocina ymp |
Kingdom | Bacteria |
Replicon accession | NC_009439 |
Strand | - |
Start bp | 1244408 |
End bp | 1245658 |
Gene Length | 1251 bp |
Protein Length | 416 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640502332 |
Product | arginine deiminase |
Protein accession | YP_001186607 |
Protein GI | 146306142 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2235] Arginine deiminase |
TIGRFAM ID | [TIGR01078] arginine deiminase |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 0.279691 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCAAGA AAGCCCTAGG CGTTCATTCC GAAGCCGGCA AACTGCACAA GGTGATGGTC TGTTCGCCAG GCCTGGCTCA CCTGCGCCTG ACCCCGAACA ACTGCGACGA ACTGCTGTTC GACGACGTGA TCTGGGTGTC CCAGGCCAAG CGCGACCATT TCGACTTCAT GACCAAGATG CGCGAGCGCG GTATCGAGGT GGTGGAGATG CACAACCTGC TGGAAGAGAC CGTGCGCGAC CCGCAAGCGC TGAAGTGGAT TCTCGACCGC AAGATCACCC CCAACAGCGT GGGACTCGGC CTGCAGGGCG AGGTGCGCTC CTTCATCGAG GGCCTGGAGC CACGACGTAT CGCCGAATTC CTGATCGGCG GCGTGTCCGG TGCCGACCTG GCCAAACACA AGGATTCCGA GGCGGCGAAG ATGTTCAATG CCTACCTGGG TGAATCCAGC TTCATCTTCC CGCCGCTGCC CAACACCCAG TTCACCCGTG ACACCACCTG CTGGATCTAC GGCGGCGTCA CCCTCAACCC GATGTACTGG CCGGCGCGCC GTCAGGAGAC CCTGCTCACC TCGGCCATCT ACAAGTTCCA CCCGGACTTC GCCGGCGAGC AGTTCGAAAT CTGGTACGGC GACCCGGACC AGGACCATGG CGCAGCGACG CTGGAAGGCG GCGACGTGAT GCCCATCGGC AACGGCACCG TGCTGATCGG CATGGGCGAG CGCACCTCGC ACCAGGCCAT CGGCCAGGTG GCGCGCGCCC TGTTCGCCAA GGGCGCGGCG CAGCGGGTGG TGGTGGCCGG GCTGGGCAAA TCGCGCGCGG CGATGCACCT GGACACCGTG TTCAGCTTCT GCGACCGCGA CCTGGTCACC ATCTTCCCCG AAGTGGCCAA CTCCATCGTG CCCTTCAGCC TGCGCCCGGA CGAGAGCCGT CCCGGCGGCA TCGACGTGCG CCGTGAGGAC AAGTCCTTCC TCGACGTGGT CGCCGAATCG CTCAACCTGC CGAAGCTGCG CGTGGTGGAA ACCGGCGGCG ATGCCTACGA GGCCGAACGC GAGCAATGGG ACGACGGCAA CAACGTGGTC TGCCTGGAGC CGGGCGTGGT GGTCGGTTAC GACCGCAACA CCTACACCAA TACGCTGCTG CGCAAGGCCG GTGTGGAAGT CATCACCATC AGCGCCAGCG AGCTGGGTCG TGGCCGTGGC GGCGGCCACT GCATGACCTG CCCGATCATC CGCGACCCGA TCGATTACTG A
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Protein sequence | MSKKALGVHS EAGKLHKVMV CSPGLAHLRL TPNNCDELLF DDVIWVSQAK RDHFDFMTKM RERGIEVVEM HNLLEETVRD PQALKWILDR KITPNSVGLG LQGEVRSFIE GLEPRRIAEF LIGGVSGADL AKHKDSEAAK MFNAYLGESS FIFPPLPNTQ FTRDTTCWIY GGVTLNPMYW PARRQETLLT SAIYKFHPDF AGEQFEIWYG DPDQDHGAAT LEGGDVMPIG NGTVLIGMGE RTSHQAIGQV ARALFAKGAA QRVVVAGLGK SRAAMHLDTV FSFCDRDLVT IFPEVANSIV PFSLRPDESR PGGIDVRRED KSFLDVVAES LNLPKLRVVE TGGDAYEAER EQWDDGNNVV CLEPGVVVGY DRNTYTNTLL RKAGVEVITI SASELGRGRG GGHCMTCPII RDPIDY
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