| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_1107 |
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| Symbol | |
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| ID | 5108080 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | - |
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| Start bp | 1243331 |
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| End bp | 1244341 |
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| Gene Length | 1011 bp |
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| Protein Length | 336 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640502331 |
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| Product | ornithine carbamoyltransferase |
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| Protein accession | YP_001186606 |
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| Protein GI | 146306141 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0078] Ornithine carbamoyltransferase |
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| TIGRFAM ID | [TIGR00658] ornithine carbamoyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.7762 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 0.256568 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTTTCA ACATGCACAA CCGTAACCTG CTCAGCCTGA TGCACCACAG CACCCGCGAG
CTGCGTTACC TGCTCGACCT CTCGCGCGAC CTCAAGCGCG CCAAGTACAC CGGCACCGAG
CAGCAGCACC TCAAGCGCAA GAACATCGCG CTGATCTTCG AGAAGACCTC CACCCGCACC
CGCTGCGCCT TCGAGGTCGC CGCCTATGAC CAGGGCGCCA ACGTCACCTA CATCGACCCG
GGCTCCTCGC AGATCGGCCA CAAGGAATCG ATGAAGGACA CCGCCCGCGT GCTCGGGCGC
ATGTACGACG CCATCGAATA CCGCGGCTTC AAGCAGGAGA TCGTCGAGGA ACTGGCCACC
TACGCCGGCG TGCCGGTGTT CAACGGCCTG ACCGACGAAT ATCACCCGAC GCAGATGCTC
GCCGACGTAC TGACCATGCG CGAGCACAGC GACAAGCCGC TGCACGAGAT CAGCTATGCC
TACCTGGGCG ACGCGCGCAA CAACATGGGC AACTCGCTGC TGCTGATCGG CGCCAAGCTC
GGCATGGACG TGCGCATCGC CGCGCCCAAG GCACTGTGGC CGAGCGACGA GCATGTCGCC
GCCTGCAAGA AATTCGCCGA GGAAAGCGGT GCGCGCATCA CCCTCACCGA GGACGCCAAG
GAAGCGGTCA AGGGCGTCGA TTTCGTCCAC ACCGACGTCT GGGTATCCAT GGGCGAGCCG
GTGGAGGCCT GGGGTGAGCG CATCAAGGAG CTGCTGCCCT ATCAGGTCAA CATGGACATC
ATGAAGGCCA CCGGCAACCC GCGAGCCAAG TTCATGCACT GCCTGCCGGC CTTTCACAAC
AGCGAGACCA AGGTCGGCAA GCAGATCGCC GAACAGTATC CGCACCTGAA GAACGGTATC
GAGGTCACCG AGGACGTGTT CGAGTCGCCC TACAACATCG CCTTCGAGCA GGCGGAAAAC
CGCATGCACA CGATCAAGGC GATCCTCGTC TCGACCCTGG CGGATATCTG A
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| Protein sequence | MAFNMHNRNL LSLMHHSTRE LRYLLDLSRD LKRAKYTGTE QQHLKRKNIA LIFEKTSTRT
RCAFEVAAYD QGANVTYIDP GSSQIGHKES MKDTARVLGR MYDAIEYRGF KQEIVEELAT
YAGVPVFNGL TDEYHPTQML ADVLTMREHS DKPLHEISYA YLGDARNNMG NSLLLIGAKL
GMDVRIAAPK ALWPSDEHVA ACKKFAEESG ARITLTEDAK EAVKGVDFVH TDVWVSMGEP
VEAWGERIKE LLPYQVNMDI MKATGNPRAK FMHCLPAFHN SETKVGKQIA EQYPHLKNGI
EVTEDVFESP YNIAFEQAEN RMHTIKAILV STLADI
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